Candidatus Hodgkinia cicadicola Dsem: HCDSEM_154
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Entry
HCDSEM_154 CDS
T00938
Symbol
rpsB
Name
(GenBank) putative 30S ribosomal subunit protein S2
KO
K02967
small subunit ribosomal protein S2
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCDSEM_154 (rpsB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hci03011
]
HCDSEM_154 (rpsB)
Ribosome [BR:
hci03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCDSEM_154 (rpsB)
Bacteria
HCDSEM_154 (rpsB)
Archaea
HCDSEM_154 (rpsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S2
Motif
Other DBs
NCBI-ProteinID:
ACT34328
LinkDB
All DBs
Position
116273..117469
Genome browser
AA seq
398 aa
AA seq
DB search
MINSALGANTAIDYASLLASGVYYGRRAPAAKSALLALGSWGEFSVLNIGGAVPALELAL
GLMFEKVAHGGKVLFVCSRSVDPEVVGELLAGAGQYVMTKPTGGVLTNWLTFKGVGERVK
RELRKASASKNKRILKLCLKQASRAASLLAGVAKRATPPSMVVVFCEACDACVVKEANVL
GVPVVGIADATASVRGIDYVVPVSSSSKPADEFVCQLMAGVCSAANMACERSRASAMTAA
AFTKLFNTSHKLCVACLHFKTAFVDAAACFKPSARRALNLKMVMASLLALKLSPLSPLRS
VIRWLTLALINRSVGDDARGLMYGLIRGLEVVFGLVTKRADAGVLASRYGVIKLDGLKLE
RFVPKPPAKLDHHAVFYALGLGGAPTTSAFDACGDVCA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgattaactcggcgctgggcgcgaacaccgccatagactacgccagcttgctggcgtct
ggcgtttactacggtaggcgcgcgccggcagcaaagtccgcgctgctggccttggggtct
tgaggcgagtttagtgtgctcaatattggaggtgcggtcccagcgctggagctggcgctg
ggcttaatgtttgagaaggtggcccacggcggcaaggtgctgttcgtgtgtagcaggtcg
gtcgatcccgaggtggttggcgagctgctggctggtgctggccaatacgttatgactaag
cccacgggaggggtgcttaccaactggctaacgttcaaaggtgtgggtgagcgcgttaaa
cgcgagctgcgaaaggcgtcagcttcaaaaaacaagcggatcttgaagctttgcttaaaa
caagcgtcgcgcgctgccagcttgcttgctggcgtagctaaacgcgccacgcccccctcg
atggttgttgtgttttgcgaggcttgcgacgcctgcgttgttaaagaagctaatgttttg
ggggtgcccgtagttggcatagccgacgccacagctagcgttcgaggcatagactacgta
gtgcccgtgagcagcagctcgaagccagcagacgagtttgtgtgtcagcttatggctggc
gtgtgttcggccgctaacatggcttgcgagagatcgcgcgcttcggctatgacggcggcc
gcttttactaagctgtttaataccagccacaagctgtgtgtggcgtgcttgcacttcaaa
actgcttttgttgacgccgcagcttgctttaagccttcggcgcggcgcgcgctcaacctc
aagatggttatggcttccctgctagcgcttaagctttcgcctctgtcgcctcttcgaagc
gttattcgctggctgacgctggcgctcattaatcgctcagtcggcgacgacgccaggggg
ctgatgtatgggctaataagggggctagaagttgtgtttgggctagtgaccaaacgcgcc
gacgccggcgtgctggcttcgcgctacggcgtcatcaagcttgacggcttaaagcttgaa
cgcttcgtgcccaaaccacctgccaagctcgaccaccatgccgtgttttacgctttaggt
ctgggcggcgcgcccaccacgtcagcttttgacgcctgcggcgacgtgtgtgcttaa
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