Candidatus Hodgkinia cicadicola Dsem: HCDSEM_177
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Entry
HCDSEM_177 CDS
T00938
Symbol
alaS
Name
(GenBank) putative alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCDSEM_177 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hci01007
]
HCDSEM_177 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hci03016
]
HCDSEM_177 (alaS)
Enzymes [BR:
hci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HCDSEM_177 (alaS)
Amino acid related enzymes [BR:
hci01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HCDSEM_177 (alaS)
Transfer RNA biogenesis [BR:
hci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HCDSEM_177 (alaS)
Prokaryotic type
HCDSEM_177 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
HTH_33
Motif
Other DBs
NCBI-ProteinID:
ACT34349
LinkDB
All DBs
Position
134551..136656
Genome browser
AA seq
701 aa
AA seq
DB search
MAASFAQLKNAFIGHCQRWGHLSIASSPVKAAAGDNELLFNNSGMAPLKRLFTSGDSVDS
PLCSVQRCVRLGGKHNDYANIGVSRRHLSFFEMMGAFSFGSYGRRYAIEMVWSLVLRLGI
RPQRVVVTVGSADSETYAAWKAVAGADCCVVTTYGEQNVWRVGDTGLCGACTEVFVVYDS
SYWELLNVVFVSHELRADGCVKLARECVDVGVGVERTLAVINQSFDVYKEIGADDAPLAA
AFGTSFGRSLRTVVDHLRCASFVAFEGTAPAATGAGYVLRKLIRRSVTEIMVSSPAPDAL
AAFKALASLVIDGLCAVDSAAAASKSKILRVLASEAKVFVDALTRGMRRALTSNGASGLH
ATHGVPKALAGAVASCVTYATAVKAVVSARCERALALNKTSVHAGVGRQVGGVGVVVSAT
GSAYVQRGALHHTILCEAGEALASGQNVWVVSNEFVTSMTACAHTGLHALLALASRFVMG
VSFKSTSVSYLGFCFEAAVDGAPLVVCALARLLKLADVGVTTCVWYTKRRGLVRKRVRVA
FESGLSFEEECCGVHVASLNLNAFSYSLRQVGAGVKLVAALRTGGACAKQEADVGGARAE
PKTTRCVSLPNALKLAYVNASALDLASKLRARALKLAVCVVPSLLTLCLRSPAHDRVLRL
VAPRTKTVFVAPGVTAVRFATGLALACGLRFVRSAFCFANE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgagcttcgcgcagcttaagaacgcgtttattggtcactgtcagcgctgaggc
cacttaagcatagcttcttcgcctgttaaagccgccgctggcgacaacgagctgctgttt
aacaacagcggcatggcgccgctgaagaggctgtttacaagtggcgattcggtcgactcg
ccgctttgcagcgttcagaggtgtgtgaggctcggtggcaaacacaacgactatgccaac
atcggagtgagcaggcggcacctcagcttctttgaaatgatgggcgcgttttcttttgga
agctatggcaggcgctacgccatagaaatggtctggagcttggtgctgaggcttggtatt
cgccctcaacgcgtggtggttacggttggcagcgcggacagtgaaacttacgctgcatga
aaggcagtagctggcgccgactgctgcgttgtaaccacatacggtgaacaaaacgtgtgg
cgcgttggcgacacaggtttgtgtggtgcctgtactgaggtgtttgtggtctacgactcg
agctattgagagctgctaaacgtggtgtttgttagccacgagctgcgcgctgacggctgt
gttaagcttgctcgcgagtgcgtggacgtgggcgtgggcgtggagcgcacgctggctgtt
ataaaccaaagctttgacgtgtacaaggagattggtgctgacgacgcgccgctagccgcg
gcgtttggcaccagcttcggccgctcgcttagaactgtcgttgaccaccttaggtgcgct
agctttgtagcgtttgagggcactgcgccggctgctacgggcgcaggctacgtgctgcga
aagcttattaggcggagcgtaaccgaaataatggttagctcgcctgcgcctgacgcgctc
gctgcgtttaaagcgcttgcgtcgctggtaattgacggcctttgcgctgtcgacagcgca
gcagctgcatcgaaatctaaaattcttcgtgtgctggcttcggaggctaaggtgtttgtt
gacgcgctgacgcgaggcatgcgccgcgcgctgacgtctaatggcgctagcggcttgcac
gcgacgcacggtgtgcctaaagcgctagccggcgccgtggcttcgtgtgtaacctatgct
actgctgttaaagcagttgtgagcgcgcgctgcgagcgcgcgctggcgcttaacaaaacc
agcgtgcacgctggtgttgggcggcaagttggcggcgtgggcgtggttgttagcgccacg
ggatcggcatacgttcagcgcggggctttacatcacacgattttgtgcgaagcgggtgag
gcgctagcaagcggccaaaacgtgtgggttgttagcaatgagtttgttactagcatgaca
gcttgcgcgcacactggccttcatgcgctgctagcgctggcttcgcgctttgtgatgggc
gtgagcttcaagtcaactagtgtaagctacttggggttttgttttgaagctgcggtcgat
ggcgctccactcgttgtttgtgcgctagctcgacttctgaagcttgctgacgtgggcgtt
acgacgtgcgtgtgatacacgaagcggcgcgggctagtccgcaagcgcgtgcgcgttgcg
tttgagtctggacttagctttgaagaagagtgctgtggtgttcacgtagcctcgctaaac
ctgaacgcgttttcttacagcttacggcaagttggggctggcgtaaagcttgtggccgcg
cttcgaacaggcggcgcgtgcgcaaaacaagaggctgatgtgggtggcgcgcgcgctgag
cccaaaaccacacgctgtgtcagcttgcccaacgcgctgaagcttgcttacgtgaacgcc
agcgccttagatctggcttctaagcttagagctcgcgccctcaagcttgccgtgtgtgtc
gttccaagcttgctaactttgtgcttgaggtcgccagcccacgaccgcgtgcttaggctc
gtcgctcccagaactaaaacggtttttgtagctcctggcgtgacagctgtcaggtttgca
actgggctagcgctagcttgcgggctgcgcttcgttagaagcgcgttctgctttgctaat
gaatag
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