Hydrogenimonas cancrithermarum: HCR_01820
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Entry
HCR_01820 CDS
T09533
Symbol
msbA
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HCR_01820 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcj02000
]
HCR_01820 (msbA)
Enzymes [BR:
hcj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HCR_01820 (msbA)
Transporters [BR:
hcj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HCR_01820 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_22
SbcC_Walker_B
AAA_16
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
BDY11870
LinkDB
All DBs
Position
194420..196132
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AA seq
570 aa
AA seq
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MKKFLATYLPYYRDYSGKIAMAIVGMFLASAATAAIAYMVKPLMDRIFVEHDVQMLYILP
AFIILAFVGKGLGTFMQSYALSFIGQDIIRKLRNRMLNHMMHLDMDFHFRFHSGELISRI
SNDILRVQNAISSDIAILLREFVTVVALLAVVIYQSPMLALYSLIIIPLAVYPVEVISRK
IKKLSHQSQEQNSDLLSSLSEIFANYEMIKSYNAQEYELGTFKERNLRFFKTNIKTVKVQ
LMLVPILELVAAVAITAVIIIGGREVLIAKTLTTGEFFSFLTALSLLIDPLRRISTAYSH
LQDAVAANERIEQVLHYKPMIVSGTKQLDHVDTIEFENVTLRYGDTVALENISLRAQKGE
VIGLVGDSGGGKSSMVNLILRFYDPAEGVVKINDIDAREIDVKSLRDRIAIVTQRIYISN
DTIAANIAYGVEPDEEKVIEALKKANLWDFVASLPEGIHTVLSEGGTNLSGGQRQRIAIA
RALYKNPDILILDEATSALDNKSEAAIIETIYALKKDLIVFMIAHRLTTIERADKILVFE
HGHIVCQGSKETLSKECETFKKLYHIASDV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttttagccacctatctgccttactatcgtgattacagcggcaagatcgct
atggcgatcgtcgggatgttcctcgcctccgccgctactgcggcgatcgcctatatggtc
aagccgttgatggacaggatattcgtcgaacacgacgtgcagatgctctacatccttccc
gctttcatcattctcgcattcgtcggaaagggtctcggaacctttatgcagtcctatgcc
ctgagcttcatcgggcaggatatcatccgcaagcttcgcaaccggatgctgaaccacatg
atgcacctggacatggattttcacttccgctttcacagtggcgagttgatcagccgtatc
agcaacgacatcctccgcgtacagaacgccatctcatccgatatcgctattttgcttcgg
gaattcgtcacggttgtcgcacttttggctgtcgtgatctaccaaagtcccatgctcgcg
ctctactcgcttatcatcattccccttgcggtctatccggtcgaagtgatttcgagaaag
atcaagaagctctcccatcagtcgcaggagcagaactccgatctgctctcctcgctgtcg
gaaattttcgccaactacgagatgatcaaatcctacaatgctcaagaatatgagctggga
acgttcaaagaacgcaatctacgcttcttcaagaccaacatcaagaccgtcaaagttcag
ttgatgctggtacccattctggagctcgtcgccgccgtcgccattacggccgtcatcatc
atcggtggacgggaagtactcattgccaaaacgctgacgaccggcgaattcttctcgttt
ctgaccgcattgtcgctcctgatcgatccgctgcgccgcatctcgacagcgtacagccat
ctacaggacgccgtggcggccaatgaacggatcgaacaggttttacactacaaaccgatg
atcgtaagcggaaccaaacagctcgaccatgtcgataccatcgagttcgaaaacgtcacg
ctgcgatacggagataccgtcgcactcgaaaacatttcgcttcgtgcccaaaaaggagag
gtgatcggcctcgtcggcgacagcggaggcggcaagagttcgatggtcaacctgattctg
cgcttctacgacccggccgagggtgtcgtcaaaatcaacgatatcgacgcgcgcgagatc
gacgtcaagtcgctcagagaccgcatcgccatcgtcacgcagcgtatctacatcagcaac
gacacgatcgccgccaacattgcctacggcgtcgaaccggatgaagagaaagtgatcgaa
gcgctgaaaaaagcgaatctctgggacttcgtcgcttcccttcccgaggggatccatacg
gtgctgagcgaaggaggcaccaacctatccggcggccagcggcagcgcatcgcgatcgca
cgggccctctacaaaaatcccgacattctgatcctggacgaagcgaccagcgcgctcgac
aacaagagcgaagcggccatcatcgagacgatttacgcactcaaaaaggatctcatcgtc
ttcatgatcgcccatcgcctcacgacaatcgaacgggccgacaagattctggttttcgag
catggacacatcgtctgccagggcagcaaagaaacgctttccaaagagtgcgaaacattc
aagaaactttaccacatagcgagcgatgtatga
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