Hydrogenimonas cancrithermarum: HCR_05200
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Entry
HCR_05200 CDS
T09533
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
hcj
Hydrogenimonas cancrithermarum
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcj03016
]
HCR_05200 (trmA)
Enzymes [BR:
hcj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
HCR_05200 (trmA)
Transfer RNA biogenesis [BR:
hcj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HCR_05200 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
BDY12208
LinkDB
All DBs
Position
complement(522215..523327)
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AA seq
370 aa
AA seq
DB search
MTCKHFGACGSCSLYTMPYEDQLKKKKEELAKLLEPFYRGETTPFASEDAHYRARAEYKI
YHDEEGCHYAMRHLDKKSFVTLGECPMVAKPIEKRMWRLLDLVNGDETLENRLFGVEFLS
TTTDEVLVTMLYHRKLDEAWIEKARYLEEELSAKIIGRSRKQKIVLSEEFVTETLCIEGK
TYRYRHYEQSFTQPNPKVNEKMIGWAMAQARRYGRGDFCELYAGAGNFTIPLSTLFAHVI
ATEISKRSIHAALENCRLNGVENITFVRMSSEEFTEALEGKRTFTRLKEVDLDAFDIGTM
LVDPPRAGLDEGTRKLIAKFDTIVYISCNPQTLARDLEELCRTHRVEDAALFDQFPYTSH
MEAGVVLTKM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtaaacatttcggtgcgtgtggaagctgttcgctctacacgatgccttacgag
gatcagctgaaaaagaaaaaagaggagcttgcaaaacttctggagcccttttatcgcggt
gaaacgacgcctttcgcttccgaagatgcccattatcgtgcacgtgcggagtataagata
taccatgatgaagagggctgccactatgcgatgcgccatcttgacaaaaagtcgttcgtc
acactcggtgagtgcccgatggtggcgaaaccgatcgaaaagaggatgtggcggctgctc
gacctcgtcaatggcgatgagacgcttgaaaaccggcttttcggggtggagtttctctcc
acgacgaccgatgaagttctcgtgacgatgctctatcatcgaaagctcgatgaggcgtgg
atcgaaaaggcgaggtatctggaagaggagctttcggccaaaatcataggacgaagccgc
aaacagaaaattgtgctgagtgaagagtttgtgaccgaaacgctctgtatcgagggaaaa
acttaccgataccgccattatgaacagagttttactcagcccaatccgaaggtcaacgaa
aagatgatcggatgggcgatggcacaggcacgaaggtatggtagaggagatttttgcgag
ctctatgccggggcgggcaacttcacgattccgctttcgacactttttgcgcacgtgatc
gcgaccgaaatctccaaacgctcgattcacgccgcgctggaaaactgcaggctcaacggg
gtggagaatatcacgttcgttcggatgagcagcgaagagtttaccgaggctttggagggg
aaacggaccttcactcgtttaaaagaggtcgatctcgacgcgttcgatatcggtacgatg
ctcgtcgatccgccgagagccgggcttgacgagggaaccagaaagctgatcgcgaaattc
gatacgatcgtctacatttcatgcaatccccagacgctcgcccgcgatctcgaagagttg
tgcagaacacaccgtgtagaggatgcggcactcttcgaccagtttccctacacatcgcat
atggaagccggagtggtgctgacgaagatgtga
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