Hydrogenimonas cancrithermarum: HCR_06020
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Entry
HCR_06020 CDS
T09533
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCR_06020 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hcj01007
]
HCR_06020 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcj03016
]
HCR_06020 (lysS)
Enzymes [BR:
hcj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HCR_06020 (lysS)
Amino acid related enzymes [BR:
hcj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HCR_06020 (lysS)
Transfer RNA biogenesis [BR:
hcj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HCR_06020 (lysS)
Prokaryotic type
Other AARSs
HCR_06020 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDY12290
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All DBs
Position
596333..597871
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AA seq
512 aa
AA seq
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MIFDNQYQQQRIEKAQTLREMGINPYQNRVVKECTNKEFLEKYAYLKESEEKEALNESCT
VTGRIKFLRLMGKAAFAKIEDESGVLQIYFSRDDLGDEWFKTVKKMIEVGDIVAATGYPF
ITRTGELTMHVKRLELVTKAITPLPEKFHGLQDIELRYRQRYLDMIMNPDVKQTFLMRSK
IVSLIRRFFEDHGFLEVETPMMHPIPGGANARPFVTHHNALGVDRYLRIAPELYLKRLIV
GGFEAVFEINRNFRNEGMDATHNPEFTMIEFYWAYHRYEDLMELTEKLFEYLFKELGLPT
KLPYGEVEIDFSTPFKRIAYKEALVEIGNVPEEILEDREAMRSFLEEKGIEVEEHLTKGQ
LWGELFDAFVEEKLIDPTFVTHFPIDISPLARRSDDNPEIADRFELFIAGKEIANGFSEL
NDPLDQYERFKAQAAQKESDDEAMHMDEDYVKALGYGMPPTAGEGIGIDRLVMLLTNQHT
IRDVILFPAMRPQKSQSESQEKKSEEKREDNK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttgatatttgacaatcagtatcagcagcagcgtatcgaaaaagcgcaaacgctgcgggaa
atgggcatcaacccctaccaaaaccgcgtcgtcaaagagtgcaccaacaaagagttcctc
gaaaagtacgcctacctcaaagagagcgaagagaaagaggcactgaacgagagctgcacc
gtcaccggacgcatcaaattcctccgtctgatgggcaaggccgccttcgcgaagatcgag
gacgagagtggtgtactgcagatctacttcagccgagacgacctgggggacgaatggttc
aaaacggtcaaaaagatgatcgaagtgggcgacatcgtcgccgcaacgggctaccccttc
attacgcgtacaggagagctgacgatgcatgtcaagcggctcgaactggtcaccaaagcg
atcacccctctgccggagaagttccacggcctgcaggatatcgagttacgctaccgccag
cgctacctcgacatgatcatgaacccggacgtgaagcagacattcctgatgcgctccaaa
atcgtcagcctgatccgccgtttcttcgaagatcacggctttttggaagtggaaaccccg
atgatgcatccgatcccggggggtgccaacgcacgccccttcgtgacgcaccacaacgct
ctcggcgtcgaccgatatcttcgtatcgcaccggagctctacctcaaacgtctcatcgtc
ggtggcttcgaagcggtcttcgaaatcaaccggaacttccgcaacgaagggatggatgcg
acccataacccggaattcacgatgatcgagttctactgggcctaccaccgctacgaagat
ctgatggaactgaccgaaaaactcttcgaatacctcttcaaagagctcggcctgccgacc
aaacttccatacggtgaagtcgagatcgacttctcgacgccattcaagcgcatcgcctac
aaagaggctctcgtcgaaatcggcaacgttccggaagagattctcgaagatcgcgaagcg
atgcgcagcttcctcgaagagaagggaatcgaagtggaagagcatttgacgaaagggcag
ctctggggcgaactgttcgacgctttcgtcgaagagaagctgatcgacccgacattcgtc
acccacttcccgatcgacatcagcccgcttgcacggcgaagcgacgacaatccggaaatc
gcggatcgtttcgagctcttcatcgccggcaaggagatcgccaacggcttcagcgagctc
aacgacccgctcgaccagtacgagcgtttcaaagcacaagccgcacaaaaggagagcgac
gacgaagcgatgcatatggacgaagactacgtcaaagcactcggctacggcatgccgccg
acagcgggagaagggatcggcatcgaccgtctggtgatgcttctgacaaatcagcacacg
attcgcgacgtcattctcttcccggcgatgcgtccgcaaaaatcccaatctgaatcccaa
gagaagaaatctgaagaaaagagagaggacaacaaatga
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