Hydrogenimonas cancrithermarum: HCR_08970
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Entry
HCR_08970 CDS
T09533
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj00300
Lysine biosynthesis
hcj00470
D-Amino acid metabolism
hcj01100
Metabolic pathways
hcj01110
Biosynthesis of secondary metabolites
hcj01120
Microbial metabolism in diverse environments
hcj01230
Biosynthesis of amino acids
Module
hcj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HCR_08970 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HCR_08970 (lysA)
Enzymes [BR:
hcj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HCR_08970 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDY12585
UniProt:
A0ABM8FJU8
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Position
complement(898025..899227)
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AA seq
400 aa
AA seq
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MIDFRALADKYDTPLYVYDFNHITEQYQKLKKAFSGRKSLISYAVKANSNLSVVSHLAGL
GSGADCVSIGEVKRALMAGIPKYQIIFSGVGKGDDEIEEALEDDILLLNLESEAEMERVE
AIAAKLGKEARISIRVNPNIDPKTHPYISTGLHENKFGVDLETAKRMYIYANNSKHLDPV
GIHFHIGSQLTELEPIREASAIVADLVRSLKAIKIEIKFFDVGGGLGIVYDNETTIEPYE
YAQAIFSTLYGLDVTIICEPGRFMVGNCGYFLTRVLYEKVNEGKRFVIVDGAMNDLLRPS
LYNAYHKVEVVGKAGDESEADIVGPVCESGDFFAKNRLLPPTEHNDLVVVYSAGAYGFVM
ASNYNTRPRPAEVAIVDGKDRCIRQRETFEDLIKLETMCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatttcagagcgcttgcagacaaatacgatacccctttgtatgtttacgatttc
aaccacatcaccgagcagtaccaaaagctgaaaaaggcgttttccggccgaaagtcgctc
atcagttatgccgtcaaggcgaactcgaatctttcggtcgtttcacatcttgcgggactc
ggctccggtgcagactgtgtttcgatcggtgaagtgaaacgggcactgatggcgggaatt
ccgaagtatcagattattttcagcggggtcggaaagggtgacgacgagatcgaagaggca
ctcgaagacgatattttgctgttgaatctcgagagtgaagcggagatggagcgtgtcgag
gcgattgcggcgaagctcggcaaagaggcgcgtatcagtatccgtgtcaatccgaacatc
gaccccaagacacatccttatatctcgacgggactgcacgagaacaagttcggtgtcgat
ctcgagacggcgaagcggatgtatatatacgccaacaattccaaacatctagatccggtc
ggcattcactttcatatcggttcgcagctgacggagctcgaaccgatcagggaggcttcc
gcgattgtcgccgacctggttcgaagtctcaaagcgatcaaaatagagatcaagtttttc
gatgtgggtggaggcctggggatcgtttacgacaacgagacgacgatcgaaccctatgaa
tatgcacaggcgatcttttcgaccctgtatggcctcgatgttacgatcatctgtgaaccg
ggacgctttatggtcggcaactgcggttacttcctgacccgtgtcctttatgaaaaggtc
aatgaggggaaacgcttcgtcatcgtggacggtgcgatgaacgatctgcttcgccccagt
ctctacaatgcctatcataaagtcgaagtggtcggcaaagcgggtgatgagagtgaagcc
gatattgtcggcccggtttgcgaaagcggtgattttttcgccaaaaaccgactgctgccg
ccgactgagcataacgatctcgttgtcgtttacagtgccggtgcctatggtttcgtgatg
gcgagcaactacaatacccgtcctcgtccggccgaagtggcgatcgtcgatggaaaagac
cgttgtatccgccagcgcgaaaccttcgaagatttgatcaagctggagacgatgtgtcta
taa
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