KEGG   Hydrogenimonas cancrithermarum: HCR_10520
Entry
HCR_10520         CDS       T09533                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hcj  Hydrogenimonas cancrithermarum
Brite
KEGG Orthology (KO) [BR:hcj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcj02048]
    HCR_10520
Enzymes [BR:hcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HCR_10520
Prokaryotic defense system [BR:hcj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    HCR_10520
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C Cas3_HD PhoH AAA_22 AAA_19 AAA_25 mCpol nSTAND3 AAA_30
Other DBs
NCBI-ProteinID: BDY12740
LinkDB
Position
complement(1047428..1049620)
AA seq 730 aa
MELSEILSHPGKRLIDHIGRIEAFDGDRLFILAAKFHDLGKCTESFQCYIRNKSDSADPH
AGVSALAFLLANADRLSSKELLMISDAIFSHHTPLKSRKKLAETLSVQMGWSWNLWQRQY
AELLANEEVERWWNLPGMDKELLEDLGFDFDELQMGPEDFIHQKLLYSKLIFADKYEAIT
SKTFHPPALKCSVEDLEHYKKRKGFDTTSFRSKAAHHIVRNWKEDPQRVVTITAPTGAGK
TLASLELALTIAKKEGKKRIIYAIPFTSIIDQTVAIFSEIFSGGITAHHYRVAYPEMDEE
GHNDYDRIKYLVESWSHPFIVTTFYQLFFALFSEHNSDNIKFQSLRNSVVVLDEVQAIPF
ELWKVMQQLFEPLAKILGTVFVLMSATMPIVARNVPELADKKVLFRSKNRYILKWIDLKE
TDEERKLEELAMEVIDAAGRGRSVLCVVNTIKNAKRLYGRLKENIEEERLYALNSYMLPV
DREKTLSALRTKTSNRVEEKVLISTQVVEAGVDLDFDIGFRELAPLSSIIQTAGRINREG
LRGQAEVKIFDKLGYEIYDSSLMSATRNHLLIALQECDGIEERQILKLVESFFATLDLTL
SDRYEILKAIEKFDFPKIGEALRKIFRLEDDYTDSVVLGVDLREMERRYFELEKEFGRWE
LKRAKEKMFKSFLPHILNIKKRDITKSGVIFKKSDLFGLLYLEEYQGIYSEKTGFLIEEE
QGIEGLFELF
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggagttgagcgaaattctttcacacccgggtaaaaggctgatcgatcatatcggccgg
atagaagcttttgatggagataggctctttatcttggccgcaaagtttcatgatctagga
aagtgtaccgaatctttccagtgctacattcgcaacaagagcgattcggcggatcctcat
gcaggtgtttcggcactggcctttttattggccaatgccgatagactctcatccaaagag
ctgcttatgatttccgatgcgatcttttcgcaccatacgccgttaaaaagtagaaaaaag
ttggctgaaacgctttcggtgcagatgggatggtcctggaatctttggcagcggcaatat
gccgagttgttggcgaacgaggaagttgaaagatggtggaaccttcccggaatggacaaa
gaactgttggaagacttgggtttcgatttcgacgagctgcagatgggtccggaagatttc
atccaccagaaattgctctattcaaaactgattttcgctgataaatatgaagcaatcact
tcgaagacctttcatcctcctgctctgaagtgttcggtcgaagatctcgaacactacaaa
aagagaaaaggtttcgatacaacgtcgtttcgctctaaagcggcgcatcatattgtgagg
aattggaaggaagacccccaacgggtggtaaccatcacggcgcctacaggtgcaggaaaa
acacttgcctctttggaactggcattgactatcgccaaaaaagagggtaaaaaacgtatc
atttacgctattccgtttaccagtatcattgaccaaactgtcgcgattttttcggagatt
ttttcaggaggcatcacggcccatcattacagggtggcctatcccgagatggacgaagag
gggcacaacgactatgacaggatcaaatatttggtagagagctggagccatccttttatt
gtaaccactttctatcagctttttttcgcgcttttcagtgaacacaacagtgacaacatc
aaatttcaaagtttgcgaaacagcgtggtggtgctcgatgaggtgcaggcgattccattt
gagttgtggaaggtgatgcagcaacttttcgagcctttggcaaagatattaggcacagtt
tttgtgttgatgagcgctacgatgccgatcgtggccagaaacgttcccgaactggcggat
aagaaggtgctttttcggagtaaaaaccgttacattctgaaatggatcgatctaaaagaa
accgatgaggaacgaaagcttgaagagctggcaatggaagtgatcgatgccgccggcaga
ggacgttcggtgctttgtgtggtcaatactatcaaaaatgccaaacggttgtatgggcgt
ttgaaagagaatatcgaagaggaacggctctatgcactcaactcctatatgttgccggtc
gatcgcgaaaagactttgagtgcattacgtacaaaaacgtccaatcgggtagaagagaaa
gtgctgatctccactcaagtggtggaagcgggagtggaccttgatttcgatatagggttc
agagagctcgcgcctcttagctccattattcaaactgcgggtcggatcaatcgtgaaggg
ttgcgagggcaggcggaagtgaagatattcgataagttgggatatgagatttatgacagt
tctttgatgagcgcgacgcgcaatcatcttttgatcgctttgcaggagtgtgacgggata
gaggagcggcagattctgaaactggtagagagcttttttgccacactggatttgaccctg
tcggaccggtacgaaattttgaaagcgatcgaaaaatttgactttccgaaaattggcgag
gccttacggaaaattttccggctcgaagacgactataccgattcagtggtgctcggcgtc
gatctgcgtgaaatggaacggcgatatttcgaacttgaaaaagagtttgggcgatgggaa
ttgaagcgtgcaaaagagaaaatgttcaaatcgtttctcccacatattctcaatatcaag
aagagagatatcacaaaaagtggtgtgatatttaagaaaagcgatctgtttggactgctc
tatttggaagaatatcagggaatatacagcgaaaaaacaggctttttgattgaagaggag
cagggaattgaagggttgttcgaattgttttga

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