Hydrogenimonas cancrithermarum: HCR_15410
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Entry
HCR_15410 CDS
T09533
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCR_15410 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcj03021
]
HCR_15410 (rpoA)
03400 DNA repair and recombination proteins [BR:
hcj03400
]
HCR_15410 (rpoA)
Enzymes [BR:
hcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCR_15410 (rpoA)
Transcription machinery [BR:
hcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HCR_15410 (rpoA)
DNA repair and recombination proteins [BR:
hcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HCR_15410 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
ZMYND8_CC
RNA_pol_L_2
Ribosomal_L12
Gly_acyl_tr_N
PASTA
flgE_D3
IF2_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDY13229
UniProt:
A0ABM8FNR9
LinkDB
All DBs
Position
1506624..1507625
Genome browser
AA seq
333 aa
AA seq
DB search
MKRIKTSPFMPSEVEIEQTGENRMRITAYPFETGYAVSLAHPIRRLLLGSTIGYAPIGVK
IEGASHEFDSVRGMLEDVAVFIINLKNLRFKIKGDEKKVEVNYSFSGPIEITGADLNNEL
VEVVTPDGFLATLNEDAELNFSLLIHQGIGYVPSEDLRDELPEGYITLDAFFTPVRAANY
TIENMLVEDNPNYEKIVFDIETDGQIDPVTAFKNTIEVMYRQMSVFNNILDINVAEETTA
PTAENPVVKTLMQGLETLGLSARSFNSLERAGLKYVGELALMSENELKEIKNLGKKSLEE
IKAKLEEAGFPVGSELDEETAKQLKKKIDATKK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcaaaacatcaccctttatgccgagcgaggtcgaaatcgagcagaccggc
gaaaatcgcatgcgcattacggcctacccgttcgaaacgggttacgccgtttctctcgcg
cacccgatccgccgcctgcttcttggcagtaccatcggatacgctccgatcggtgtgaaa
atcgagggggcatcgcacgagtttgattctgtacgcggaatgcttgaggatgttgcagta
tttatcatcaacctcaaaaacctccgtttcaaaatcaaaggtgacgagaagaaggtcgaa
gtgaactacagtttcagcggcccgatcgaaatcaccggagcagacctgaacaatgaactg
gtcgaagtcgttacgcctgacggatttcttgcgacgttgaacgaagatgcggagctcaat
ttctctctgctgattcaccagggtatcggatatgtgccgagtgaagatctgcgagacgaa
ctgccggaaggatacatcacactcgatgcattctttacgccggtacgtgccgcgaactat
acgatcgagaacatgctggtcgaggacaatccgaactacgaaaagatcgtcttcgacatc
gagaccgacggtcagatcgacccggtcacggcgtttaaaaacacgatcgaagtgatgtat
cgacagatgtccgtatttaacaatatcctggacatcaatgtggcggaggagacgacggca
ccgactgccgaaaatcctgtcgtcaaaacattgatgcagggtctcgaaacgctgggactg
agtgcacgaagcttcaactccctggagcgtgcgggacttaaatacgtcggagaactggcc
ttgatgagtgaaaacgaactcaaagagatcaaaaacctcggcaagaaatcgcttgaagag
atcaaggcgaaactcgaagaggccggtttcccggttggcagcgaactcgacgaagagaca
gcgaaacagctgaaaaagaaaatcgacgcaacgaaaaaataa
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