Hydrogenimonas cancrithermarum: HCR_16700
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Entry
HCR_16700 CDS
T09533
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj02024
Quorum sensing
hcj03060
Protein export
hcj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HCR_16700 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HCR_16700 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HCR_16700 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hcj02044
]
HCR_16700 (ffh)
Enzymes [BR:
hcj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HCR_16700 (ffh)
Secretion system [BR:
hcj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HCR_16700 (ffh)
Eukaryotic Sec-SRP protein
HCR_16700 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_31
AAA_22
AAA_24
AAA_17
6PF2K
nSTAND3
AAA_30
AAA_33
Fe-ADH
GTP_EFTU
DO-GTPase1
AAA_16
AAA_18
APS_kinase
ResIII
AAA_19
ArsA_ATPase
NPHP3_N
AAA_14
KTI12
Motif
Other DBs
NCBI-ProteinID:
BDY13358
LinkDB
All DBs
Position
1640355..1641701
Genome browser
AA seq
448 aa
AA seq
DB search
MFEHLSNSFQNAISKIRFKDDEKALKRALDELKKSLLKADVHHKVVKELLSVVERETKRK
GIGKENFLGALKEELTDILTAPGKQGFVYSPTPPTVVMMAGLQGSGKTTTSGKLAYYLKL
RKKKVLLAAADLQRLAAVEQLRQIANQIEVDVFADESIKDPVEVAKKALEKAKEGNYDVL
IVDTAGRLAIDEALMDEIKRVKEVLHPDEIFYVADSLTGQDAVRSAAAFNKELGLTGVIL
SKYDGDSKGGVALGIAKQVGVPLRFIGSGEKMPDLEVFIPDRIVGRLMGAGDIESLAEKA
SAVIDEKEAKRVAKKIKKGQFNFNDFLEQLEQMKKLGSLKSLIGMIPGMGKMAGAIKDLD
LENSGEIKKIKALISSMTPKERENPDLLNNSRKRRIAQGAGLSQMEVNKVLKQFKNAAKM
AKKFSGKKGMQDLQNMMSQMQGGGGFPR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaacatttaagcaacagttttcagaacgccatcagcaagatacgtttcaaggat
gatgaaaaggccctgaagcgtgcactcgatgaactgaaaaaatcgctgctcaaagcggac
gtacatcacaaagtcgtcaaagagctgctaagcgtcgtcgagcgtgaaacgaaacgcaaa
ggcatcgggaaagagaactttctgggagcgctcaaagaagaactgaccgatatcctgacg
gcaccgggaaagcaggggttcgtctacagcccgacacctccgacggtggtcatgatggcc
ggcctgcaggggtccggcaagacgacgacttcggggaaactggcctactacctcaagctt
cgcaagaagaaggttcttctggcggcagccgaccttcagcggctggccgcggtcgagcag
cttcgccagatcgcgaaccagatcgaagtcgacgtctttgcggacgaatcgatcaaagat
ccggtcgaggttgccaaaaaggcactcgagaaagcgaaagagggcaactacgacgtcctc
atcgtcgacaccgccggccgtctggcgatcgacgaagcgctgatggacgagataaagcgc
gtcaaagaggtgcttcatccggacgagatcttctatgtcgccgactcgctgacgggccag
gatgccgttcgaagtgccgcggcgttcaacaaagagctcggcctcaccggtgtcattttg
agcaaatacgatggcgacagcaagggtggtgtcgcgctcggtatcgccaagcaggtaggc
gttccgctgcgctttatcggttcgggcgagaagatgccggatctggaggtcttcatcccg
gaccgtatcgtcggccggctgatgggagcgggcgacatcgagtctctcgccgagaaggca
tcggccgtcatcgacgaaaaagaggcgaagcgggtcgcgaaaaagatcaaaaaagggcag
ttcaacttcaacgactttctcgagcagctcgagcagatgaagaaactcggaagcctgaaa
tctctgatcggaatgattccgggcatggggaaaatggcgggtgccatcaaagatctggat
ttggaaaactccggtgagatcaaaaagatcaaagcgcttatcagctcgatgacgccaaaa
gagcgggaaaatccggatctgctcaacaacagccgcaaacgccgtatcgcacagggtgcg
ggtttgagccagatggaggtcaacaaagtcctcaaacagttcaagaacgccgcgaagatg
gcgaagaagttttccggcaaaaaagggatgcaggatctgcagaacatgatgagccagatg
cagggcggcggcgggttcccccgctga
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