Hydrogenimonas cancrithermarum: HCR_17080
Help
Entry
HCR_17080 CDS
T09533
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj03030
DNA replication
hcj03430
Mismatch repair
hcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCR_17080 (dnaX)
03430 Mismatch repair
HCR_17080 (dnaX)
03440 Homologous recombination
HCR_17080 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcj03032
]
HCR_17080 (dnaX)
03400 DNA repair and recombination proteins [BR:
hcj03400
]
HCR_17080 (dnaX)
Enzymes [BR:
hcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCR_17080 (dnaX)
DNA replication proteins [BR:
hcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCR_17080 (dnaX)
DNA repair and recombination proteins [BR:
hcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCR_17080 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
DNA_pol3_gamma3
ResIII
TIP49
AAA_5
AAA_30
AAA_assoc_2
AAA_24
AAA_19
AAA_16
Ribosomal_60s
DEAD
TIP49_C
Motif
Other DBs
NCBI-ProteinID:
BDY13396
LinkDB
All DBs
Position
complement(1677034..1678752)
Genome browser
AA seq
572 aa
AA seq
DB search
MSQALALKYRPKRFEDLIGQDSISQTLAMALDQNRLGHAYLFSGLRGSGKTSTARIFSKA
LLCENGPTSKPCDSCEQCRMANEGRHIDIIEMDAASSRKIDDIRDLIEHTKYKPSVGRYK
VFIIDEVHMLTKEAFNALLKTLEEPPEFVKFILATTDPLKLPATILSRTQHFRFKKIAKP
LVIKHLEHILNTENIAFEPEALEILARSGSGSLRDTLTLLDQAIVYSKSHVDVATVTQML
GIIDPEFLEKLFDAVLQKDERKIREYLKDLENYEAEMVIDEMSLFLKEKLLQNDPKFSPM
LLERFYRILAEAKPLLALNTDGDFVLSLTLFKMVEAMNIKQIDEMIEALEAELRMENGKW
KTERAAPIPAPTPSPAAEAKQARAPAPDTQHPTPNNEIRFKKLIEKLYDRNADLGKAFEE
SIEFVGYEDGVLSWASHAEGENRELLKTHFGIVRHFVQDVFGVGTKIQLVKSDNPPPPKV
ETAVKNGTPNERSPSSSTDADLSSPESDANGATHTGSMVEDVDCNNAGCVTGNCSEEEPS
KEHDAKEILNDPMVKKAQELFGAKKIVIRSKV
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacaggcgctcgcactcaaataccgtccgaaacgtttcgaagatctgatcggccag
gactccatttcccagaccctggcaatggcactcgaccagaaccggctggggcacgcctac
ctcttttccgggctgcgcggaagcgggaagacgtcgacggcgcgcatcttctccaaggcg
ctcctgtgtgaaaacggcccaacttccaaaccgtgcgacagctgcgaacagtgccgcatg
gccaacgaagggcgccatatcgacatcatcgagatggatgcagcctcaagccgcaagatc
gacgacatccgcgacctcatcgagcatacgaagtacaaaccctccgtcgggcgttacaaa
gtcttcattatcgacgaagtgcacatgctcaccaaagaggcgttcaacgcgcttttgaag
acgctcgaggagccgccggagttcgtgaagttcatcctggcgacgaccgacccgctgaaa
ctgccggcgacgattcttagccgtacccagcacttccgcttcaaaaagatcgccaagcca
ctcgtcatcaaacatctcgagcacattctcaacaccgagaatatcgcgttcgaacccgaa
gcgctggagattctggcgcgcagtggcagcggctcgctgcgcgatacgctgacccttctc
gaccaggccatcgtctactccaaaagccatgtcgacgtcgcgacggtgacacagatgctc
ggcatcatcgacccggagtttctcgaaaaacttttcgatgcggtcttgcaaaaggatgag
agaaagatccgcgaatacctcaaagatctcgaaaactacgaagcggaaatggtgatcgac
gagatgagcctctttctgaaagagaagctgctgcagaacgacccgaaattctctccgatg
ctgctggagcgcttctaccgcatcctcgccgaagcgaaaccgctgctggcactgaatacc
gacggcgatttcgtgctttcgctcacccttttcaaaatggtcgaagcgatgaacatcaag
cagatcgacgagatgatcgaggcgctcgaagcggaattgagaatggagaatggaaaatgg
aaaacggagcgagccgctcccatcccggctccaaccccttcccctgccgcggaggccaaa
caggctcgagccccggcgcccgatacccagcacccgacacccaacaacgaaatccgcttc
aagaagctcatcgaaaaactctacgaccgcaatgccgatctgggaaaagcgttcgaagag
agcatcgagttcgtcggctacgaagatggcgtgctttcgtgggcgagccatgcggaaggg
gaaaaccgcgaactcctgaagacccatttcggcatcgtccgccacttcgtgcaggacgtt
ttcggagtcggcacaaaaatccaactggtcaagtcggacaacccgccgcctccgaaggtc
gaaacggccgtaaaaaacggtacgccgaacgagcgaagcccttccagctccaccgatgcc
gatctctcctcaccggagagtgacgccaacggggcgacccatacggggtcgatggtcgag
gatgtcgactgcaacaatgccggatgcgtcaccggcaactgcagcgaagaggagccaagc
aaagagcacgacgccaaagagatcctcaacgacccgatggtcaaaaaagcgcaggagctc
ttcggcgccaaaaagatcgtcatccgctcgaaagtatga
DBGET
integrated database retrieval system
