Hydrogenimonas cancrithermarum: HCR_19250
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Entry
HCR_19250 CDS
T09533
Name
(GenBank) hypothetical protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HCR_19250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcj03400
]
HCR_19250
DNA repair and recombination proteins [BR:
hcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HCR_19250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ExoX-like_C
RNase_T
QSregVF_b
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDY13613
LinkDB
All DBs
Position
1909593..1910492
Genome browser
AA seq
299 aa
AA seq
DB search
MMKFVILDTETTGAEERDRICQLAYIVALPQLVGTMIEEVHEDLCKPPLPISYGAMAVHH
ITNEMVEKKPPCIETESYRRLEALNNPENILVIQNASFDLAMLQKEGFSSKMRLIDTLRC
LRHLHPDLEAHGLQYVRYAFGLYRSETKEAKSIGLKIQAHDALGDVLVLKLLLDYLLIDH
SPEKLIELTAKPIIYKTFRFGKYKGEEIVEVARKDPGYLEWMLMDKEGEEGLDEDWRQTL
EKALEAAEEEAVWLFPFGKYKGQSVEEIAQHDIGYLRWSLENMDKLSEGMKKAIRRVVG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatttgtaatactcgataccgaaacgaccggcgccgaagagagggaccggatc
tgtcagcttgcctatatcgtggccctaccgcaattggtgggtacaatgatcgaagaggta
cacgaagatttgtgcaagcctccgcttccgatctcctacggtgcgatggccgtgcaccac
atcacgaacgagatggtagagaaaaagccgccatgcatcgagacggaaagctacagacgg
ctcgaagcgctcaataacccggaaaatattctggtgattcagaatgcatctttcgatctt
gcgatgctgcaaaaagaggggttttcatcgaagatgaggctgatcgacacgctgcgctgc
ctgcggcatctgcatcccgatctcgaggcgcacggcctgcagtatgtacgttacgccttc
ggtctttacagaagcgaaacgaaagaggcgaagtcgatcggcctgaagatccaggcccac
gatgcgcttggcgatgtgctggtgctgaagctgctgctcgattaccttctgattgaccat
tcgcccgaaaagctgatcgaactgacggcaaagccgatcatctacaaaacgttcagattc
ggcaaatacaaaggcgaggagattgtcgaggtggccaggaaagatccgggctatctggag
tggatgctgatggataaagagggcgaagaggggctcgacgaagattggcggcagacactt
gaaaaggcgctggaggcggcggaggaagaggcggtgtggctcttcccgttcggcaaatat
aaagggcagagcgtcgaggagatcgctcagcacgacatcggatatctcagatggagtctc
gagaatatggataaattgtcggaagggatgaaaaaggctattcggcgcgtcgtcggatag
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