Hydrogenimonas cancrithermarum: HCR_20510
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Entry
HCR_20510 CDS
T09533
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj03030
DNA replication
hcj03430
Mismatch repair
hcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCR_20510
03430 Mismatch repair
HCR_20510
03440 Homologous recombination
HCR_20510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcj03032
]
HCR_20510
03400 DNA repair and recombination proteins [BR:
hcj03400
]
HCR_20510
Enzymes [BR:
hcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCR_20510
DNA replication proteins [BR:
hcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCR_20510
DNA repair and recombination proteins [BR:
hcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCR_20510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDY13739
UniProt:
A0ABN6WZC0
LinkDB
All DBs
Position
complement(2052425..2053036)
Genome browser
AA seq
203 aa
AA seq
DB search
MFERLKRNWMKKLLKEPRYAFLFDTPPKDEVVVFDTETTGLDIKKDEIISIGAVRVKGNR
ILTSSQMYIKVKCDRAISEESIKIHQIRVCDMEDALDPDEAMDRFLRFIGPRPLVGYYLE
FDVAMINKWIKPKLGVTLPNQLIEVSALYYDKKIGTIPQGHVDLRFDTIIETLDIPKLGK
HDALNDAIMTAMMYIKLKHVKKL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaagactcaaacgcaactggatgaaaaagctgctgaaagagccgaggtacgct
tttttgttcgataccccgccgaaggatgaagtcgtcgttttcgataccgaaacgacagga
ctcgatattaaaaaagacgagatcatctcgatcggtgccgtccgagtcaaaggtaaccgc
atcctgaccagttcgcagatgtatatcaaagtcaaatgtgatcgggccatcagcgaagag
agcatcaagatccaccagatcagggtatgcgatatggaagatgcactcgacccagacgaa
gcgatggaccgttttttgcgattcatcggcccaaggccgctggtcggctactatctcgaa
ttcgatgttgcgatgatcaacaagtggatcaaaccaaaattaggtgtgactttgcccaat
caactaatagaagtttctgcgctatactatgataaaaaaatcggcacaatacctcaaggg
catgtcgatctgcgtttcgatacgataatcgaaacgctggatattccaaagcttggcaag
catgatgcactcaacgacgcgatcatgaccgccatgatgtatatcaaactcaaacacgtc
aaaaaattataa
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