Hydrogenimonas cancrithermarum: HCR_21600
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Entry
HCR_21600 CDS
T09533
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hcj
Hydrogenimonas cancrithermarum
Pathway
hcj03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hcj00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HCR_21600 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hcj03011
]
HCR_21600 (rpsA)
Ribosome [BR:
hcj03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HCR_21600 (rpsA)
Bacteria
HCR_21600 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
OB_PDCD11
S1_2
S1_RRP5
Spt6_S1
OB_cyt-4
DUF6387
Motif
Other DBs
NCBI-ProteinID:
BDY13848
UniProt:
A0ABM8FN93
LinkDB
All DBs
Position
2182682..2184349
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AA seq
555 aa
AA seq
DB search
MDKASMEEFENMEEDFASMLDAYEKKEQGGSITDGVIVEIRESDNQALVDVGRKQEAAVN
LDELKDEEGNLKFNVGDTIPVVITGYRNERPQASYQKAIRKANVRKFIEEHENDAENMVV
EGKVVRKNRGGYFVIGEDNIEFFMPMSQAAFAMGKNPIGKDIKAIILKLDKDRDSIVISR
RKYLDQLRKERKEIVDKLMEEEKIVEGTIKKITSYGMFVDVGGIEGLVHYSEISYKGPVN
PATLYEEGDVVEVKAIGYDPKKRHLSLSIKQTMPDPWEEIIDQLEEGDAIKVTVSNIEPY
GAFVDLGNDIEGFLHVSEVSWDKDIKNPKDYLNVGDEIDVEVIEINPETRRLRVSYKNLQ
PKPFEEFLQQYKEGDVVKGTVTTLTDFGAFVRIGKVEGLLHNQDVSWEKGAKAKDLLKKG
DEVEVKITKIDSEQERISLSKKALEESPIDRFAKEHKVGDIVKGKIRDVKDFGVFVELED
GVDALIRKEDVSPLNVDELNKGDEIEGVIVMLDPSSNKIRLSVRRLERQKERDALNEFNS
SEDRLTIGDIIKDQL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggataaggcctcaatggaagagtttgagaacatggaggaagacttcgcgtcgatgctg
gacgcgtatgagaaaaaggagcagggcggaagtataacggatggtgtaattgtagagatt
cgtgagagtgacaaccaggcattggtcgatgttgggcgaaagcaggaagctgccgtaaac
ttggatgaattgaaagatgaagagggtaacctcaagttcaatgttggcgatacgattccg
gttgtcattacaggctaccgcaacgagcgaccgcaggcgtcttatcagaaggcgattcgt
aaagcgaatgttcgtaaatttatcgaagagcatgaaaacgatgcagaaaacatggtcgtt
gaaggaaaagtggttcgcaaaaatcgcggtggatatttcgtgataggcgaggacaatatc
gaatttttcatgccgatgagccaggcggcattcgcaatggggaaaaatccgatcggcaaa
gatatcaaagcgatcattctcaagctcgataaggaccgggattcgatcgtcatttcacgt
aggaagtatctcgaccagcttcgaaaagagcgtaaagagatcgtcgacaaactgatggaa
gaagagaaaattgtcgaggggacgatcaaaaaaatcacaagctacggtatgtttgtcgat
gtcggtggaatcgagggactcgtccactacagtgaaataagctacaaagggcctgttaat
ccggcaacactttatgaagagggtgatgtcgtcgaagtcaaagcgattggttacgatccg
aagaaacgtcatctttcactctccatcaaacagaccatgcctgatccgtgggaagagatt
atcgatcagctggaagagggtgatgcgatcaaagtcaccgtgagcaatatcgaaccgtat
ggcgcattcgtcgatctgggcaatgatatcgagggattcctgcacgtttccgaagtttca
tgggacaaagatatcaaaaatccgaaagactatctcaatgtcggtgacgaaattgatgtc
gaagtcatcgagatcaatcctgaaacccgccgtcttcgtgtttcgtacaaaaatctacag
cccaaaccgtttgaagagtttttacagcagtacaaagagggtgatgtcgtcaagggtacc
gttacgacactgaccgatttcggtgcgttcgtccgtattggcaaggtggaaggacttctg
cacaatcaggatgtctcctgggagaaaggtgccaaagcgaaagatcttttgaagaagggc
gatgaagtcgaggtgaagattactaaaatcgattcagagcaagagcgtatcagtcttagc
aaaaaagcgcttgaagagagcccgatcgaccgttttgcgaaagagcataaagtaggagat
atcgtcaaaggaaaaatccgcgacgtaaaagattttggagttttcgtagagctggaagac
ggcgtcgatgctttgatccggaaagaagatgtttctcctttgaatgtggatgagttgaac
aaaggtgacgagatagagggtgtcatcgtcatgcttgatccgtcatccaacaaaatcaga
ctctccgttagaagacttgagcgtcagaaagagcgcgatgctctgaacgaattcaacagc
agtgaagatcgtctgacaatcggggacatcattaaagaccaactgtaa
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