Halomonas cupida: MRB56_01220
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Entry
MRB56_01220 CDS
T11149
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hck Halomonas cupida
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hck03016
]
MRB56_01220 (truB)
Enzymes [BR:
hck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MRB56_01220 (truB)
Transfer RNA biogenesis [BR:
hck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MRB56_01220 (truB)
Prokaryotic type
MRB56_01220 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XNS34734
LinkDB
All DBs
Position
256271..257227
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AA seq
318 aa
AA seq
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MARRRRGLPVDGVLLLDKPQGMSSNHALQRARRLFQAQKAGHTGTLDPMATGLLPVLFGE
ATKFSQHLLDADKVYRTRVELGASTDTGDAEGDVVARSTVPALEESDLTGMMAGFVGEQQ
QTPPMYSALKLNGRKLYELAREGKSVERASRAIKVYDTRLLSASLDSASPNFDIEVRVSK
GTYVRTLAEDMARALGCDGHISQLRRLKTGPFDASGMVSLEMLEALPDQAAREAQLAPID
SLLKHLPAHQLSVKGARALTYGQPARQELDTTMARDVGDGPVRLYHEEAFIGLGVVEPEG
DIVPRRLLSSFVAGSVQH
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgccgccggggattgccggttgatggtgtgttgttgctggacaagccccag
ggcatgtccagtaaccatgccctgcaacgtgcacgccgtctgtttcaggcccagaaggcc
ggtcataccggcactctggatccgatggccactggtctgttgccggtgctgttcggtgag
gccaccaagttttcccagcaccttctggatgccgacaaggtctaccggacccgagtcgaa
ctgggtgccagtaccgacaccggggatgccgaaggtgatgtggttgccaggtccaccgtt
ccggcacttgaggagtccgacctcactgggatgatggcgggatttgtcggagagcaacag
cagacaccaccgatgtattcggcgttgaagctcaacggccgcaagctctacgaactggcc
cgtgagggcaagagtgtcgagcgtgcaagtcgggcaatcaaggtgtatgatacgcggcta
ctttccgccagcctggacagcgcttcgccgaacttcgacatcgaggttcgcgtcagcaag
ggcacatatgtgcgcacgctggctgaagacatggccagggcgctgggctgtgacggacac
atatcacagcttcgacgtctcaagacggggcctttcgatgccagtggcatggtcagcctc
gagatgcttgaagccttgccggatcaggctgcacgagaagcgcaactggcgccgatcgac
agtctgctcaagcaccttcctgctcatcaactgagtgtgaagggggcgcgggcactgacc
tatggtcaacccgctcgacaggaattggataccaccatggcgcgtgacgtcggggatggt
ccagttcgcctctatcatgaggaggccttcattggtcttggtgtggtggagccggagggg
gacattgttcctcgccgattgctgagttcgtttgtggcgggctcggtgcagcattga
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