Halomonas cupida: MRB56_01245
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Entry
MRB56_01245 CDS
T11149
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hck Halomonas cupida
Pathway
hck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRB56_01245 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hck03019
]
MRB56_01245 (pnp)
03016 Transfer RNA biogenesis [BR:
hck03016
]
MRB56_01245 (pnp)
Enzymes [BR:
hck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MRB56_01245 (pnp)
Messenger RNA biogenesis [BR:
hck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MRB56_01245 (pnp)
Transfer RNA biogenesis [BR:
hck03016
]
Prokaryotic type
tRNA degradation factors
MRB56_01245 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XNS34739
LinkDB
All DBs
Position
261689..263821
Genome browser
AA seq
710 aa
AA seq
DB search
MNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDDTVVLCTVVARKEPNPAQSFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVICTVLSTD
RNHDPDIAAMIGTSAALTISGVPFSGPIGAARVAFNEERGYFLNPTVEELQGSELNMVVA
GTEKAVLMVESEADELLEDEMLGAVLYGHQEMQTAIKAINELVAEAGKPKWDWQPAVENT
ALKEALASGFESKVGEAYRITDKMQRQDALSALKAEAVEQLGGEEEGKFDAAEVGSAFAS
LEKRVVRSRVVKGEPRIDGRDHKTVRPLNIEVGVLPKAHGSAVFTRGETQAVVVATLGTL
RDAQLIESLEGERKDRFLLHYNFPPYSVGEAGFMGGPKRREIGHGRLARRGVQAMLPAED
DFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKDDDGFAVLT
DILGDEDHLGDMDFKVAGSAEGVTALQMDIKIEGIDEQIMETALTQAHEARLNILQQMND
VIAESRTELSDNAPSMATIKIDPEKIRDVIGKGGATIRKICEDTGASIDLDDDGTVRIYA
DDKQAAKKAIDTVLAITAEAEIGKLYNGKVVRIADFGAFVNIMPGTDGLVHISQIVPERV
NDVRDFLNEGDEVVVKVLDIDNRNRVKLTLKEITEEEKAAFAAEAAETEI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtcaaaaagacatttcagtacggtcgcagcaccgtcaccctggaaaccggg
cgcatcgcccgccaggccactggtgccgtgatggttaccatggacgacactgtggtgctg
tgcaccgtggtggcaaggaaggagccgaaccctgcgcaatccttcttcccactgtccgtc
cactatcaggaaaagacctacgccgtcggcaagattcccggtggtttcttcaagcgtgaa
ggccgtccgaccgagaaggaaaccctgacctcgcgtctgatcgaccgtccgatccgcccg
ctgttccccaagggcttcatgaacgaggtgcaggtgatctgtaccgtgctgtccaccgat
cgcaatcatgatccggacattgccgcgatgatcggcacctccgctgcgctgaccatctcc
ggtgtgccgttcagcggtccgatcggtgcggcgcgtgtggccttcaacgaggagcgcggc
tatttcctcaaccccaccgttgaagagctgcagggctccgagctgaacatggtcgttgcc
ggtaccgaaaaggccgtgctgatggtcgagtccgaagctgatgagctgctcgaggacgag
atgctgggtgcggtgctgtatggccaccaggaaatgcagactgccatcaaggccatcaac
gagctggtcgccgaagccggcaagccgaagtgggattggcagcctgcggtcgagaacacc
gcactcaaggaagcgctggccagcggtttcgagagcaaggtgggtgaggcctatcgcatc
accgacaagatgcagcgtcaggatgccctgtccgcgctcaaggccgaggccgtcgagcaa
ctgggcggtgaggaagaaggcaagtttgatgccgccgaagtcggtagcgccttcgccagc
ctcgagaagcgtgtcgtacgttcacgcgtggtcaagggtgagccgcgtatcgatggccgt
gaccacaagacggtgcgtccgctcaacatcgaagttggcgtgctgcccaaggcacacggc
tccgcggtgtttacccgtggtgagactcaggctgtggtcgttgcgaccctcggcacgcta
cgcgatgcccagctcatcgagtccctcgagggtgagcgcaaggatcgcttcctgctgcat
tacaacttccctccctactccgtgggtgaggctggcttcatgggtggccccaagcgtcgc
gagatcggccacggccgtctggcccgccgtggtgtccaggccatgctgccggcagaagat
gatttcccgtacaccatccgtgtcgtgtccgagatcaccgagtccaacggttccagctcc
atggcttccgtgtgtggttcctcgctggctttgatggacgccggtgtaccgctcaaggcg
ccggttgccggtatcgccatgggtctggtcaaggacgatgatggtttcgccgtactgacc
gacatcctcggtgatgaggatcacctcggcgacatggacttcaaggtggccggttccgct
gaaggcgtgaccgcactgcagatggacatcaagatcgagggtatcgacgagcagatcatg
gaaacggccctgactcaggcccatgaagcccgtctgaatatccttcagcagatgaatgac
gtgattgccgagagccgtaccgagctgtccgacaatgcgccgtccatggctaccatcaag
atcgacccggaaaagatccgtgacgtcatcggcaagggtggtgcgaccattcgcaagatc
tgcgaagacaccggtgcctccatcgatctggacgacgatggaaccgtgcggatctatgcc
gacgacaagcaggcggcgaagaaggccatcgataccgtgctggcgatcaccgcggaagcc
gagatcggcaagctgtataacggcaaggtcgtgcgcatcgctgactttggtgctttcgtc
aacatcatgccgggtaccgacggtctggtgcacatctcgcagatcgtgcctgagcgcgtc
aacgacgtgcgtgatttcctcaatgagggtgacgaggtggtggtcaaggtgctcgacatc
gacaaccgtaaccgcgtcaagctgaccctcaaggaaatcaccgaagaggaaaaggccgcg
tttgcagccgaggcggcagaaaccgagatctga
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