Halomonas cupida: MRB56_01745
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Entry
MRB56_01745 CDS
T11149
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hck Halomonas cupida
Pathway
hck03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRB56_01745 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hck03021
]
MRB56_01745 (rpoA)
03400 DNA repair and recombination proteins [BR:
hck03400
]
MRB56_01745 (rpoA)
Enzymes [BR:
hck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MRB56_01745 (rpoA)
Transcription machinery [BR:
hck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MRB56_01745 (rpoA)
DNA repair and recombination proteins [BR:
hck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MRB56_01745 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
XNS34826
LinkDB
All DBs
Position
366534..367532
Genome browser
AA seq
332 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IAGVDHEYSAIEGVQEDVIEILLNLKDVAARMHSRDEAVLSLNKQGPAVVTAGDIAVDHD
VEIVNPEHIIAHVNEGAELKMQLKVARGRGYEPADVRSEGDDESRAIGRLQLDATFSPVR
RVSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQE
VVEEEDHIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLN
EIKDVLAARGLSLGMRLENWPPASLKDDKATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttctccgtcctcgcgacatcaaggtcgaagagatcagc
gcacaccacgcaaagatcgtgctcgaaccgttcgagcgtggcttcggccacacgctgggt
aatgctctgcgtcgtatcctgctttcttccatgcccggctgtgccgtggttgaggcagaa
atcgcaggtgtggatcatgagtacagcgcgatcgagggcgtccaggaagatgtcatcgaa
atcctcctgaacctcaaggacgtggcggccaggatgcacagccgcgacgaggcggtgctc
tcgctgaacaagcagggcccggccgtcgtcaccgctggtgacatcgccgtcgatcatgat
gtcgagatcgtcaaccccgagcacatcatcgcccatgtcaatgagggtgcagagctgaag
atgcagctcaaggtggcccgcggtcgtggctatgagcctgcggatgtccgcagcgaaggc
gacgacgaatctcgtgccatcggccgtctgcagctggatgcaaccttcagccccgtgcgt
cgtgtttcctactcggttgaggctgcgcgtgttgaacagcgcactgacctcgacaagttg
atcattgatctggaaaccgatggcaccctggatccagaagaggcaatccgtcgcagcgcc
accatcctgcaggagcagctggcagcgtttgttgacctggaagccgacaaggaacaggaa
gtggtggaggaagaggatcatatcgatcccatcctgctgcgccccgtagacgatcttgag
ttgaccgttcgtagcgccaactgcctcaaggccgagaatatctactacatcggcgatctg
attcagcgcactgaagttgagctgttgaagaccccgaatctcggcaagaagtccttgaat
gaaatcaaggatgtgttggcagcacgtggtctgtccctcggcatgcggctggaaaactgg
ccgccggcgagcctgaaggacgacaaggccacggcctga
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