Halomonas cupida: MRB56_04225
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Entry
MRB56_04225 CDS
T11149
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
hck Halomonas cupida
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hck03400
]
MRB56_04225
DNA repair and recombination proteins [BR:
hck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
MRB56_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
AAA_16
SWI2_SNF2
AAA_22
AAA_30
zf-tcix
AAA
DZR
DUF7577
SLFN-g3_helicase
MciZ
Motif
Other DBs
NCBI-ProteinID:
XNS35286
LinkDB
All DBs
Position
895416..897257
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AA seq
613 aa
AA seq
DB search
MTEHATTLPTAATPPLVLPSLRPYQREAVSRVVEYFRGSDEPAVVVLPTGSGKSLVISEL
ARLARGRVLVLAHVRELVEQNHAKYLAYGLEADIFSAGLGRRESARQVVFGSVQSVVRHL
ARVSDSESAHGPFTLLVIDECHRVSLEADSSYHRVIDHLRQRNPHLKVLGLTATPYRLGQ
GFIYHRHYHGMVRGAEDCFFRDCVFEQPLRLMVKQDYLARPLKVDAAVERYDFSLLSPGS
SGLFREEELNRVVAASRATPGIIAEVIERARGRRGVMIFAATVAHAEEVLGYLPAEQAAL
VTGDTASDERYRLIEAFKARQLKYLVNVSVLTTGFDAPHVDLIAILRPTESVGLYQQIVG
RGLRLAEGKQDCLILDYAGNPWDLYAPEVGSPKPDSDSEPVQVECPACGHANLFWGKRDG
EVVIEHYGRRCQGLVDDYGDPLDSPGRGGQQCSFRFRFKTCGDCGAENDIAARRCHGCQV
LLVDADDKLRDALKLKDARVLRVTGMQLEAVVNGRGLPRLKVTYHDEDGATLNEWFALET
PAQRRAFTLAFLRHHLRAPGIGWAPTSVQQVCDEQWRLRAPDFVVGRRVGRHWQIREKLF
DYQGRYRKADSAE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacacgcgacaaccctcccgaccgcagcgacgcccccattggtgctgccgagc
ctgcgcccctatcaacgcgaggcggtgtcgcgggtggtggagtacttccgcggcagtgat
gaacccgcggtggtggtgctgcctaccggcagtggcaaatcactggtgatctctgaactg
gcacggctggcaagaggccgggtgctggtgctggcgcatgtgcgtgaactggtcgagcag
aaccacgccaagtatctcgcttatgggctcgaggctgacatcttcagtgccgggctgggt
cgccgggaaagtgcccgtcaggtggtatttggttcggtacagtcggtagttcgccatctg
gcccgggtcagtgatagtgaatctgcgcacgggccattcacgttactggtgattgatgag
tgtcatcgagtgtcactggaagcggattccagttatcaccgtgtcatcgatcatctgcgt
cagcgtaacccacacctgaaggtactggggctgaccgcaacgccttatcgcctggggcag
ggctttatctatcatcgccactatcacggcatggtgcgcggggccgaggactgtttcttc
cgtgattgcgtgttcgagcagcctctgcggttgatggtcaagcaggattacctggctcgg
cccctcaaggtggatgccgccgtcgaacgttatgacttctcactgctgtcacctggcagc
agtgggttgtttcgagaggaagagctgaatcgggtggtggccgccagccgcgctacaccc
ggcatcattgccgaggtgatcgagcgggcccggggtcgccgcggagtgatgattttcgct
gccaccgttgctcacgccgaagaggttcttggctatctgcccgccgagcaggcggccctg
gtgaccggcgatacggccagtgatgagcgttaccggctgatcgaggcattcaaggctcgc
cagctcaagtacctggtcaatgtctcggtgctgaccaccggcttcgatgctccccatgtc
gacctgattgctattctgcgccccaccgaatcagtggggctctatcaacagatcgttgga
cgaggcctgcgtctggccgagggcaagcaggactgcctgattctcgactatgccgggaat
ccctgggatctgtacgcaccggaagtgggcagcccgaagccggattcagatagcgagccg
gtacaggttgagtgtcccgcctgtggtcacgccaacctgttctggggcaaacgtgatggc
gaggtggtgatcgagcactatggtcgccgctgtcaggggctggtcgatgactacggtgat
ccactcgatagtcctggaaggggcgggcagcaatgcagctttcgttttcgtttcaagacc
tgtggtgactgcggcgccgagaatgacatcgccgcacgtcgttgccatggctgccaggta
ctattggtggatgccgacgacaagctgcgtgatgcgttgaagctcaaggatgcgcgagtg
ttgcgcgtgacgggcatgcagcttgaggccgtcgtcaatgggcgaggtttgccacggctc
aaggtgacctaccatgatgaagacggtgctaccctcaatgagtggttcgcgctggaaacg
ccagcccagcgccgcgcctttaccctggcctttctgcgtcatcatctgcgcgccccgggg
atcgggtgggcaccgaccagcgttcaacaggtctgtgatgagcagtggcgcctgcgtgct
ccggatttcgtggtcggccgcagggtaggtcgccactggcagatacgcgagaagctgttc
gactaccaggggcgttaccgcaaggcagatagtgccgaatga
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