Halomonas cupida: MRB56_06380
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Entry
MRB56_06380 CDS
T11149
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hck Halomonas cupida
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hck01002
]
MRB56_06380
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hck01011
]
MRB56_06380
Peptidases and inhibitors [BR:
hck01002
]
Cysteine peptidases
Family C82
MRB56_06380
Peptidoglycan biosynthesis and degradation proteins [BR:
hck01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MRB56_06380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
XNS35694
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Position
1430242..1431951
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AA seq
569 aa
AA seq
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MFSTCSLVEQCRRVSHKGALLLLLTTLPCSALAVSTDAATGPPAVGIDGSINVEHSLADQ
PATVGGVSDSALGNLDELQRFYALRGQRPVWTNMARVDALVAALESLSGDGLMPSDYHPR
QLAIEGQQALASRQGSTALRAFESKATSTLLTAMAHLQRGKVDPHQIDNGWEVDIAPPSF
DLVTMSLELDEGDVEAVIELARPDFEPYRQLRSALAEYQSIEQQGGWPLLSARDEPLRPG
DRDHDVAMLRQRLGMEGGDGVIAADTGYYPQVSLDAPDAEIYDPQLVEAVRRFQRHHLLA
DDGVVGPDTRLALNVSVSQRIDQIRVNMERVRWLLHGLPDSFVLVDIAGYQLTYFRPDGQ
VWRSRIVVGQPYRRTPTLRSEITYLTLNPTWTVPPTIYREDILPKVRNNPGYLASRGLYP
LTPSGQRLDPHAVDWSNPGGVMLRQGAGPGNPLGRLVIRFPNDHLVYLHDTPSRHLFDRA
QRALSSGCIRVEGVTQLAQMLFDDSGTSASVSRLLADGKTRNISLERHIPVVLNYWTVQP
ETDGSLAFRPDIYHRDTDVVAALDRPLVL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtacttgttcactggtcgagcagtgtcgaagagtatcgcataaaggggcattg
ttgctgttgctgacgactttaccgtgttcggctttggccgtctctaccgacgctgctact
ggcccgccggcggtgggtattgatgggagcatcaacgtagagcacagccttgccgaccag
cctgccactgtcggcggcgtatctgactcggcgctgggtaacctcgacgagctgcagcgc
ttctacgcgctacgtggccagcgcccggtatggaccaacatggcgcgcgtcgacgccctg
gtggcagcactggaaagtctttcgggtgatggtttgatgccctccgactatcaccctcgg
caactggctatcgaaggtcagcaggcgttggcgtcgaggcaagggagtacggccctccgc
gccttcgaaagcaaggctaccagtactcttctgactgccatggctcacctgcaacgtggc
aaggtcgacccgcaccagatcgataatgggtgggaagtggatatcgctcctccctccttc
gacctggtcaccatgtcgctagagctggatgagggggatgtcgaggcggtgatcgagctg
gcacgtcccgatttcgaaccctatcgtcaactgcggtcggcgttggccgagtaccagagc
attgaacagcagggcggttggccattgctgtccgcgcgcgatgagccgctgcgtcccggg
gatcgcgatcacgatgtggccatgctgcgacagcgccttggcatggagggaggtgatgga
gtcatcgccgccgataccggctattatccacaggtctcactggatgccccggacgccgaa
atctacgatccacaactggttgaggccgtgcggcgcttccagcgccatcacctgctggct
gatgatggcgtggtgggaccggacacccgtctggcgctgaacgtgtcggtgtcccagcgt
atcgatcagattcgggtcaacatggagcgcgtgcgctggttgctgcacgggctgccggac
tcctttgtgctggtcgatattgccggttatcagttgacctacttccgccctgatgggcag
gtctggcgcagccgcatcgttgtcggccagccttatcgacgtacgccgacactgcgctcg
gagattacctacctgaccctcaacccgacctggacggtaccaccgaccatctatcgggaa
gatatcctgccgaaggtccgcaacaatccaggttatctggccagtcgtggcctctatccg
ctgacaccatcgggtcagcgtctggatccgcatgccgtggactggtccaatccaggaggc
gtgatgctgcgacagggagccggtcccggcaaccctctggggcggctggtgattcgcttt
cccaatgatcatctcgtgtatctccacgatactccgtcgaggcatctgttcgatcgcgcc
caacgcgccttgagttcgggctgtatccgtgtcgagggggtcacgcaactggcgcagatg
ctgttcgatgactcggggacatcggcgagcgtcagccgtctgctggcggatggcaagacc
cgcaatatctcgctggagcgccatattccggtggtgctcaattactggaccgttcagccg
gaaactgacggcagtctggcattccgtccggatatctaccatcgcgacaccgatgtggtg
gcggcgctggaccgccctctggtgctctga
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