Halomonas cupida: MRB56_08120
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Entry
MRB56_08120 CDS
T11149
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
hck Halomonas cupida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNS36010
LinkDB
All DBs
Position
1789411..1795866
Genome browser
AA seq
2151 aa
AA seq
DB search
MARSRGGDGVDEGAAGYGDSVMITNSGAIILDSDHDPGSIGNLISALSIGGEGDADNDNY
KSSGGQGGRGGNVDVANSGTLTVESVVADQDRGMSGILGWSQGSTGGNQNSGVVGDQLGG
DGGAGYTVTITNDGQVNLGSEDSSLKGLDYAWGITGKSKGGRGGDDNGSGGTGGAIDIHN
GASGSAPINIYSNTSGSVRGIYALSQGANGTASHDSTDNGGNGARGSTISVDTYSDITVV
NTADVSELSGGIVAINQGGSGGTGYDSSNGGAGGAASNDVMTLGVEQGATVSTWGDHVMG
VVGLTQGGRGGDGRDGEKNSAGGRGGEGSQIQMDVDGGTIETDGNYAYGVLGGSIGGQGG
NGGDDTAVVGTSGGGGYGGDAGSVGAYVASGSEITTLGDFSAALTLHSIGGGGGTGGDFT
NVLGGGAGNGGNGGNGELATINNNGGTITTHGDHSYGLLAQSIGGSGGTGGIAAGLTLEL
GGDGGSGGSSGTASVENVGSVTTSGYSAHGIVAQSISGGGGAAGMAGGVLSIGGSGGGTD
NTNGNTAKVENSGDISTVGDAAIGIMAQSIGGGGGTGAGAAGIATVGGQGTAGGDGGDTS
VMLTGGSITTQGEMAHAIMAQSIGGGGGNGGNVIDMSIGLPALGIGGSADGGGDGGTVCV
TNVDDGGACSASSNMNPVTITTADSGALGVLAQSIGGGGGNGGNATGGDLGLASFQVGGI
GGGGGNADTVNVAFGNLDLTTRGSHAPGIVAQSVGGGGGNGGSANSYSAGVGFTASMAVG
GSGSSGGAGGPVSVKLTNSVVKTGQDGGDVTDAIGVLAQSISGGGGNGGSSVADALTVAV
PTTDGVSLAMSVATAVGGSGGGSHSASSVDAVLDGGTVSTKGASSHGLVAQSIGGGGGNG
GSASSMAATAGIADTVSADIGVAVGGSGGGGGNGGTVNVVLKNTSSVTTADDYANAIVAQ
SIGGGGGNGGVGSVNNHQIGGGFNLTANIGVGGAGSGGASGGTANVDLDAGTSVQTSGSG
SRGVLVQSIGGGGGTSQGVSVGLAGSGGTEETGDITASVGVSVGRSGGGGGSGGAVNVTT
AGNIITSGGDADGVLAQSIGGGGGLGGSVASATPRDSILPDQGTSYGFTVGIGGAGGEAA
DGGTVTLTHAGDITTTGDWADGIVAQSIGGGGGAGGSSSMSGSQATANIAVGVGGSGSGG
GDGGKIDITFDDNSGNSINTAGYSAHGVLLQSIGGGGGQGGDGSDQANGKITVGGGIGGS
GGAGGNGGSVVTRDWINLSTSGDDAHGIVAQSIGGGGGVGGAGNSTAAEGDDSHTIDLVV
GGAGSAGGSGGTVDLDLGTSLITHGDRAFGVVAQSIGGGGGIGGAGEADNIASLVVGGSA
GGTINGGDVSVDITTKSSLQTGGLAAHGIVAQSIGGGGGIGGTASGAPLSFQGNDAGSYG
DGGDVAVTLDNAHIETDGDHSFGIIAQSIGGGGGFGGNGSSAFMGSNRNASTAGMSGQVT
VNVINDGSVRANGEDSAAIFAQSDSRQINGGVEVNIAGTVVGGSGDKGAGMIVAGGTDQG
DHANSVTVNEGGSLSAASGVAIRYHGSDNSNNDNPNAGGLAITNESLGRIDGSIEAYDVT
GNLLTRTQGTGTAMVSTATFATPYAAVSAVPAHPVTVLNEAGGTLTGATRYQADVTNEGR
LDVGHPGRSDTLTVAGDFVQSDSGDTHVAVDFAGNEGDLMAINGAATLEGTLTLEPLSIL
YGAELTVLTAEEGIVGRFDDDASELITFKHSVTEKGYAIAVSEASFSDDRHGLNEQQENV
ADYLGDVFRAGDINTAEAVAALELAARDGGYREALSRLSSGASLAAEAASFELARGRFST
VLDCSAQAGAWSDGQNCLQILGSGQYLDQGGGDDAFGYDGHVDTVGVAGATMLNPDWRIG
GAIGYETADFNGEDGYGATEGETVFAGISATREIGPVTLAAAGVFSRGHFDTTRQPGLTA
GADTARGDHDVTSVATRLRASYRKDFGSSYVTPMMDLDVIWTDSEGYTEDGAGELALEVD
DSEETAFVATPAIEAGHHFTLDNGADLRVYSSAGVSLSSLDRYRTSARFAGSDPAVGSFD
SDVAMPDVVGRISAGAEVLNSRNLGLGVRYDGAFGSDLTNHGGSLSLTYRF
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcacgtggtggcgatggcgtcgacgagggggcggcggggtacggtgatagc
gttatgatcacaaattccggcgctatcatcctggacagcgatcacgacccaggctcgatc
ggcaacttgatttcggcattgagcattggcggcgaaggggatgcggataatgacaattac
aaatcgagtggcggacaaggcgggagaggcgggaacgtcgacgtcgccaactcggggacg
ctgaccgtagaatcggttgtcgcagatcaagacagaggcatgtccggcattcttggctgg
agccagggcagcacggggggcaatcagaacagcggtgtggtgggcgaccaactggggggc
gacggcggcgctggttacaccgtcaccatcaccaatgatggacaagtgaatcttggcagc
gaggatagctcactgaaggggctggactatgcctggggcatcaccggcaaatccaaaggc
ggtcggggtggcgacgacaacggttcaggcggtacgggtggcgccatcgatattcacaat
ggagcatcaggtagtgcaccaatcaatatctactcgaacacttccggcagcgtgcgcggc
atctatgcgctgagccagggcgccaacggcacggcttctcacgacagcaccgataatggc
ggcaacggcgcacgcggaagcaccatttcagtcgatacatattccgacatcactgtcgtc
aataccgccgatgtcagcgaactatcaggcggtatcgtggccatcaaccaaggggggagt
gggggcaccggctatgactcgtcgaacggcggtgctggtggggccgccagcaacgatgtg
atgaccctgggcgtcgaacaaggcgctacggtgtcgacatggggcgatcatgtgatgggc
gtggtcgggctgacccagggcgggcgcggcggcgatggcagggatggtgagaagaatagc
gccggagggcgcggcggtgagggtagtcagatccaaatggatgttgatggcggcaccatc
gagacggacggcaactatgcctacggggtattgggtgggagcatcggcggtcagggcggc
aacggcggcgacgacacggcggttgtcggtaccagtggtggtggtggctacggcggtgat
gccggcagcgtcggtgcctacgtagcgagtggttccgagattacgacgctcggggatttc
tcggctgcattgaccttgcactcgatcggcggcggtggcggcaccggtggcgacttcacc
aatgtgctcggcggcggtgcgggtaatggtggcaatggcggcaatggtgagttggccacc
atcaacaataatggcgggacgatcaccactcatggcgatcattcctacggtcttcttgcg
cagtcgatcggtggcagtggcggtaccggtggcatcgccgctgggttgaccctcgaattg
ggtggcgatggcggcagcggcgggtcgtcgggaacggccagtgtcgagaatgtcggctcg
gttaccacctccggctattcggcacatggcatcgtcgcgcagtcgatcagcggcggtggc
ggtgctgccggcatggccggcggcgtgttgtcgatcggtgggtccggcggtggcaccgat
aataccaatggaaatacggccaaagtcgagaattcgggcgatatcagcaccgtcggcgat
gcggcgatcggcatcatggcgcagtcgatcggcggcggtggtggcaccggcgctggggcg
gcgggtattgccaccgtcggcggccagggcactgccggtggcgatggcggagacaccagc
gtaatgctgacaggtggctcgattaccacccagggcgagatggcgcatgcgatcatggcg
caatcgattggcggtggtggtggcaatggcgggaatgtgatcgatatgtcaatcggcctt
cctgcgttgggtatcggcggtagcgccgacggtggcggtgatggtgggacggtctgcgtc
acgaatgttgatgacggcggcgcttgttcggccagctccaatatgaaccctgtcaccatc
acgaccgcggattccggtgcgctcggcgtacttgctcagtctattggcggcggcggcggc
aatggcggtaacgccacgggcggcgatctcggactcgccagcttccaggtcggcggtatt
ggtggtggtggcggcaacgctgataccgtaaacgttgccttcggcaatctcgacttgacg
acccggggctcgcatgcgccgggcatcgtggctcaatcggttggcggcggtggtggcaat
ggcggctctgccaactcctattccgcgggtgttggcttcacggcgtcgatggcggtgggc
ggttccgggagttctggcggtgccggcggccccgtttccgtgaagctgaccaacagcgtc
gtcaagaccggtcaggatggcggagacgtgaccgacgccatcggcgtgcttgcgcagtcg
atcagcggcggtggtggcaatggcggttcctcggttgccgatgcactcactgtggcggtg
ccgacaaccgacggcgtctccctggcgatgagtgtggccacggccgtcggcggcagcggt
ggaggaagtcactccgccagcagcgtagatgcggtactggatggcggtaccgtctccacg
aaaggtgcttcgtcgcatggcctcgtggcgcagtcgatcggtggcggtggtggcaatggc
ggcagtgcgtcgtcgatggccgcaacggccggcatagcggacacggtcagcgcggacatt
ggtgtagcggttggcggctcgggtggcggtggcggcaatggcggcaccgtcaacgtggta
ctcaagaatacctcctccgtaacgactgccgacgattatgccaatgcgattgtagcgcag
tcgatcggcggcggtggtggtaacggcggtgtcggcagtgtgaataaccatcagatcggc
ggcggcttcaacctgacggctaatattggtgtcggcggcgccggtagcggtggtgccagc
ggcggaacagcgaatgtggatctcgacgctgggaccagtgtgcagaccagtgggtccggg
tcgcgtggcgtactcgttcagtcaatcggcggcggcggcggcacgtcacagggcgtcagc
gtgggcctggcgggcagcggggggacggaggagacaggcgacattactgcctcggtcggc
gtttccgtcggtcgcagtggtggtggcggcggtagtggtggcgcggtcaatgtcaccaca
gcgggtaatatcatcaccagcgggggggacgccgatggggtgctcgcgcaatcgatcggt
ggtggcggtgggcttggtggctcggtcgcgtcagccacacctcgagactcgatattgccc
gaccagggcaccagctacggtttcaccgtcggcatcgggggcgctggaggtgaagcggcc
gacggtggcactgtgactctgacgcacgctggcgatatcaccaccacgggtgactgggcc
gacggcatcgtcgcgcaatcgatcggaggcggaggcggcgcgggcggctcctccagcatg
tctggcagtcaggcaaccgccaacatcgccgtgggggttggcggcagtggtagcgggggc
ggtgatggcggcaagatcgacatcacgttcgacgataatagcggcaacagcatcaacacc
gcgggttatagtgcccatggcgtgctgctgcagtcgatcggtggcggcggtggccagggg
ggggacggctctgatcaggctaacggcaagatcaccgtaggcggcggtataggcggtagt
ggaggggccggcggcaatggcggcagcgtggtaaccagggattggatcaacctgtcgacg
agcggtgacgacgcacatggaatcgtcgcgcagtcgatcggcggcggcggcggcgttggc
ggagccggcaacagcacggcggccgagggcgacgatagccatacgatcgatctcgtcgtc
ggcggagccgggagtgctgggggcagcggtggcacagtcgatctcgacctcggcacgtca
ctgattacccatggcgatcgagcgtttggcgtcgtggcgcagtcgatcggcggcggtggc
ggcattggtggcgccggagaggcagacaacattgcttcgctggtggtcggcggctcggcc
ggcggcacgatcaacggcggggatgtctcggtcgacatcacgacgaagagctctctccag
accggtggcctcgctgctcacggcatcgtcgcgcagtcaattggcggcggcggtggaatt
ggcggcaccgcgtccggcgcaccgctttccttccaggggaacgacgcgggtagctatggc
gacggcggtgacgttgccgtgacactcgacaacgcgcatatcgaaactgacggggatcat
tcctttggcatcatcgcacagtcgatcggtggtggtggcggctttggaggcaacggatcc
agcgcctttatgggatcgaacaggaacgcaagcacggccggcatgagcggccaggtgacc
gtcaatgtcatcaacgatggatccgtccgagcgaatggcgaggactcggccgccatcttt
gcgcaaagcgactcgcgccagatcaacggcggcgtagaagtgaacatcgccggcacggtc
gtcggcggctcgggtgacaagggcgcagggatgatcgtcgccggtggtactgatcagggc
gaccacgccaattccgtcacggtcaatgaaggtggttcgctcagtgccgcctccggcgtc
gcgatccgctaccacggcagcgataactccaataacgacaatcccaatgccggtggcctg
gcgatcaccaatgaaagtcttggccggatcgatggcagtatcgaggcctatgatgtaacc
ggaaatttgctgactcgcactcagggaaccggtaccgcgatggtcagcacggcaaccttc
gccaccccgtatgccgccgtcagcgcggtgccggcgcatcccgtgacggtgctcaacgag
gcaggcggcacgctgaccggggcaacgcgttaccaggcggatgtcaccaacgaggggcgt
ctggacgttggtcatccggggagaagcgatacactgactgtcgccggagattttgttcag
tccgacagcggtgacacccatgtcgcggtcgatttcgccggtaacgagggcgatctgatg
gcgatcaacggggccgcaacgttggaaggtaccctgacactcgagccgctgtcgatcctc
tacggcgcggagttgacggtactgaccgccgaggagggcatcgtcgggaggttcgatgat
gacgcatctgaactcatcaccttcaagcattcggtgaccgagaaggggtacgcgatagcc
gtgtcggaggcgagtttcagtgatgatcgccacggtctgaacgagcagcaggagaatgtc
gcggactaccttggcgatgtgttccgggcgggcgacatcaacaccgctgaggctgttgcg
gcgttggagctcgccgcgcgcgatggtggctaccgcgaggccctgtcgaggctctcgtcc
ggggcaagtctggccgcggaagcggcaagtttcgaacttgcacgtggccggttctcgacg
gttcttgactgttcggcccaggccggtgcctggtccgacggccagaattgcctgcagatc
ctggggtcgggacagtatctcgaccaggggggcggcgatgacgccttcggctatgacggg
catgttgataccgtcggcgtggccggtgcgacgatgctgaaccccgactggcggatcggc
ggggcgatcggctacgagaccgctgacttcaacggtgaggacggttacggcgcgaccgag
ggcgagacggtcttcgccggtatctcggctacacgcgagattggtccagtgaccctcgcc
gcagccggggtgttcagccgtggccatttcgacacgacccggcagccgggtcttaccgcc
ggcgccgacacagcacgcggcgatcacgatgtgaccagcgtggcaacacgcttgcgggcc
agctatcgcaaggatttcgggtcatcctacgtaacgccgatgatggatcttgacgtcatc
tggaccgattccgagggttacaccgaggacggtgcgggagagctggcgctggaggtggac
gacagcgaggaaacggccttcgtggcaacaccggcgatcgaagcgggacaccatttcacc
ttggacaacggtgcagacctgcgggtttacagcagcgcgggggtcagtctttcgtcactc
gaccgctaccggaccagcgcacgctttgccggttctgacccagcggtaggttcctttgac
agtgacgtggccatgcccgatgttgtcggccggatcagcgcgggggcggaggttctgaac
tctcgaaacctgggattgggcgtacgttacgacggcgccttcggtagtgacctgaccaac
catggcggaagtctgagtctgacctacaggttctga
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