Halomonas cupida: MRB56_09490
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Entry
MRB56_09490 CDS
T11149
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hck Halomonas cupida
Pathway
hck00550
Peptidoglycan biosynthesis
hck01100
Metabolic pathways
hck01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MRB56_09490 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MRB56_09490 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hck01011
]
MRB56_09490 (mrdA)
Enzymes [BR:
hck01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MRB56_09490 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hck01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MRB56_09490 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
SURF1
Motif
Other DBs
NCBI-ProteinID:
XNS36270
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All DBs
Position
2074230..2076131
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AA seq
633 aa
AA seq
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MREPRNTLKNPEHALRIFRVRASLAVLVVLLLSSLLVGRLCYLQIVEHEVYSTRSENNRV
RVEPLPPTRGLIYDRHGRLLAENRPTYNLTLVRERVDDLDATLTLLVDLLQLPADEVEEF
KVRSRQRQRPFQPALLMSDLTESQIARLAVNRHRLPGVEVQAQLLRYYPQAEIMSHALGY
VGRINAEELKELDPGNYAGTHFIGKTGIENFYEEQLHGRAGLRKVETNARGRVLRELGHT
APQPGSDLTLTIDIDMQQLAYDLLDGRRGAIVAIAPQTGEILAMASVPGFDINQFVTGID
VASYRGLQEDLDLPLFNRATRGSYPAGSTIKPFMAMSGLIEGVITPEQVIYDPGYYQLPN
DDRRYRNWLRWGHGRVDLERALAVSNNTYFYSLAHDLGIDRIHDNLEHFGFGTRVAADVA
GQGDGLLPSRDWKQARFEQSWYPGETLSVGIGQGYLQVTPLQLASATAVLANRGHWVRPR
LARSIGEEDVPADLPDTPADIEVSNDSYWDRVFSGMEKVLSGREGTARRTGAGLEYRMAG
KSGTAQVFSLGQNQKYNASELRERLRDHALFMAFAPVDNPQIAVSVIVENAGGGSTHAAS
LARAMTDAWILDHNCGLPEQESCLGGNDAESRP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagcctcgtaataccctgaagaaccccgagcacgcgctgcgtatctttcgtgtg
cgtgccagcctggcggtgttggtggtgttgttgctgtcgagcctgctcgtgggccgactt
tgttatcttcagatcgtcgagcatgaagtctacagcacacgttccgagaacaatcgtgtg
cgcgtggagccgctgccacccacccgtggcctgatctacgatcgccatgggcgcctgctg
gccgagaatcgtcctacctacaacctgacgctggtcagggagcgtgtcgatgatctcgac
gcgaccctgaccttgctggttgatctgctccagcttcccgccgatgaggtcgaggaattc
aaggtgcgttcgcgccagcgtcagcgccccttccagccggcgctgctgatgagcgatctt
accgagtcacagatcgcacggctggcagtcaatcgtcaccgtttgcccggggtcgaggtc
caggcccagttgctgcgctactatccgcaggcagaaatcatgtcgcatgcccttgggtat
gtcggacggatcaatgccgaggaactgaaggagctcgacccgggcaattacgctggtact
catttcatcggcaagaccgggatcgagaacttctatgaggagcagctgcatggtcgcgcc
gggctgcgcaaggtggaaaccaatgcgcgcggtcgagtgctgcgcgaattggggcataca
gcaccacaaccgggtagtgatctgaccctgaccatcgacattgatatgcagcagttggcc
tatgacctgctcgacggtcgacgcggcgccattgtggcgatcgctccccagaccggcgag
attctggccatggcatcggtacccggcttcgacatcaatcagttcgtcaccggcattgat
gtggcctcctatcgagggttgcaggaggacctcgacctgccgctgttcaatcgtgccacc
cgtggcagctatccagcgggctcgaccatcaagccgttcatggccatgagtgggctgatc
gaaggtgtcatcacgcctgagcaggtgatctatgaccctggctactaccaactgcccaat
gacgatcgtcgctatcgcaactggttgcgctgggggcatggccgagtcgacctcgagcga
gcgctggcggtgtccaacaacacctatttctattcgcttgcgcatgacctggggatcgac
cgtatccacgacaacctcgagcattttggcttcggtactcgagttgccgccgatgttgcc
gggcaaggcgatggtctgttgccgtcgcgggactggaaacaggcccgcttcgagcagtcc
tggtacccgggggagacgctctcggtggggatcggccagggctatctccaggtgacgcca
ctgcagctggcatcggccactgcggtgctggccaaccgtgggcattgggtgcgtccgcgc
ttggcgcggagtatcggtgaagaagacgttccggcggatctgccggatacgccagcggat
atcgaagtcagcaatgacagctattgggatcgggttttcagtggcatggagaaggtgttg
tccggtcgcgaaggaaccgcacgacgtaccggtgctggcctggagtaccgtatggccggc
aagtccggtaccgcccaggtgttttcgctgggtcagaaccagaagtacaacgcctcggag
ctgcgtgagcgcttgcgcgaccacgctctgttcatggcctttgcaccggtcgacaatccg
cagattgcagtatcggtgatcgtcgagaacgccggtggcggttcgactcacgccgccagc
ctggccagagccatgactgatgcctggattctcgatcacaattgcgggcttcccgaacag
gaatcctgtctcggggggaatgatgcggagagtcgcccatga
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