Halomonas cupida: MRB56_11630
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Entry
MRB56_11630 CDS
T11149
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hck Halomonas cupida
Pathway
hck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MRB56_11630 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hck03400
]
MRB56_11630 (ruvB)
Enzymes [BR:
hck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MRB56_11630 (ruvB)
DNA repair and recombination proteins [BR:
hck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MRB56_11630 (ruvB)
RecFOR pathway proteins
MRB56_11630 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_22
Mg_chelatase
TIP49
AAA_14
AAA_17
nSTAND3
RNA_helicase
ABC_tran
AAA_18
AAA_28
Rad17
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
XNS36665
LinkDB
All DBs
Position
complement(2587193..2588221)
Genome browser
AA seq
342 aa
AA seq
DB search
MIDSDRLVTADVGDGEQRVDHAIRPRRLADYIGQPRVREQLEIFIHAARARDESLDHTLV
FGPPGLGKTTLANIIATEMGVGLTSTSGPVLERAGDLAAMLTNLKAGDVLFIDEIHRLSP
VVEEILYPAMEDFQLDIVIGEGPAARSIKLDLPPFTLVGATTRAGRLTSPLRDRFGIVQR
LEFYAIDELTEIVSRSARLLGVDTDEGGAHEVARRSRGTPRIANRLLRRVRDFAEVRAEG
HITAQVADDALNMLHVDHHGLDHMDRRLLLAMIEKFDGGPVGVDSLSAAIGEERDTIEDV
IEPYLIQQGLMMRTARGRVVTRQAWQHFGIAPDDRAVDATTD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgattgacagtgatcggctggtcacagcagatgtcggggacggcgaacagcgtgttgat
cacgccatacgtcctcgtcgtctggcggactatatcggccagccacgggttcgggagcag
ttggagatattcatccacgcagcgcgagcaagggatgaaagcctcgaccatacgctggtg
ttcggccccccggggctgggcaagaccaccctggccaacatcatcgccaccgagatgggc
gtagggctgacatcgacatccggtcctgtgctggagcgggctggagacctggcggcaatg
ttgaccaatctcaaggccggtgatgtgcttttcatcgatgagattcatcgcctgtcaccg
gtggtcgaggagatcctctatccagcgatggaagacttccagctcgatattgtcatcggc
gaggggcctgcagcgcgctcgatcaagctcgacctgccgcctttcacgctggttggggcc
acgaccagggcggggcgtttgacctcaccgttgcgtgatcgcttcggcattgtgcagcga
ctcgagttctacgccatcgatgaactgaccgagattgtctcgcgctcggcacgcttgctc
ggcgttgatactgatgagggcggcgcccatgaggtggctcgccgctcgcgtggtacaccg
cggattgccaatcgcctgttgcgacgggtgagggatttcgctgaggtacgcgcagagggg
cacattaccgctcaagtggcggatgacgcgctcaacatgctgcatgtcgatcaccatggc
ctggaccacatggatcgtcggctgctgctggccatgatcgaaaaattcgacggcggacct
gtcggagtggactccctgtcggcggcgatcggtgaggagcgtgacactatcgaagacgtg
atcgaaccctatctgattcagcaaggtctgatgatgcgtaccgcgcggggacgcgtggtg
actcggcaggcctggcaacatttcggcatcgcccctgatgacagggccgttgatgcaacc
actgattga
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