Halomonas cupida: MRB56_12175
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Entry
MRB56_12175 CDS
T11149
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
hck Halomonas cupida
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hck03000
]
MRB56_12175
Transcription factors [BR:
hck03000
]
Prokaryotic type
Helix-turn-helix
LacI family
MRB56_12175
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XNS32258
LinkDB
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Position
complement(2699625..2700674)
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AA seq
349 aa
AA seq
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MDDRSSGNEPRGRKRHRAGGRVTLSDVAREAGVAPITVSRALNTPQRVSDRVRARIDAAV
ETLGYVPNLIAGGLASAGTRVIPVIVPSLSILTFIEVVHGIQQTLERAGYQMLLASTDFD
LDREAQLVNTVLGYSPSGVILTGLRHRPAVGERLREWGRPVVEIMEHGDNCIDMSVGVDG
HALGRFMADYLVGRGYRRMLFAGSNMERDYRARQRWEGFRDQLATHALKADLLEYAEAAS
YRVGVEALDAALALPEPPDAIHFSNDILATGALLEAQRRGVKVPQQIAITGYLGLELGEF
LNPSLTTLSVARTQMGVEAASMLLARLDGEQPEPVQRDIGYALIERGSA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaggtcgtcaggtaacgagccgcgggggcgcaagcgtcatcgtgccggggga
cgagtcaccttgagtgatgtggcacgagaagcaggcgttgcgccaattacggtatcgcgg
gcattgaacactccccagcgagtatcggatcgggtcagggcgaggattgatgccgcggtc
gagacattgggctacgtgcccaacctgattgctggggggttggcctctgcgggaaccaga
gtcattccggtgatcgtaccttcgctgtcgattctgacctttatcgaggtcgtgcatggc
attcagcagaccctggaaagggcgggctatcagatgctgcttgcctccacggatttcgac
cttgaccgtgaggctcaactggtcaatacggtgcttggctattcaccttccggggtgatt
ctcaccggactgcgccatcggccggcagtgggagagcgtctcagggagtgggggcggcct
gtggtcgagatcatggagcacggagacaattgcatcgacatgagtgtaggggtggacggc
cacgctctgggccgcttcatggcggattatctcgttggcaggggctatcgccgcatgctg
tttgccggttccaacatggagcgggactatagggctcgtcagcgctgggagggcttccgt
gaccaactggccacgcatgcactcaaggcagatctattggagtacgctgaagcggcctcg
tatcgagtcggtgtggaggcgctggatgctgctcttgcgttgcccgagcctccggatgcc
atccacttctccaatgacatcctggccacaggcgccttgctggaggcccaacgcagggga
gtgaaggttcctcagcagattgccatcactggctatctgggcctggagctgggggagttt
ctcaatccgtcgctgacgactctatcggtggcgagaacacagatgggtgtggaggccgcc
tcgatgctgctggcccgactggatggagagcagccggaaccagtgcagcgtgatatcggc
tatgccctgatcgaaagaggcagtgcctga
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