Halomonas cupida: MRB56_13885
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Entry
MRB56_13885 CDS
T11149
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hck Halomonas cupida
Pathway
hck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MRB56_13885 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hck03400
]
MRB56_13885 (recO)
DNA repair and recombination proteins [BR:
hck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MRB56_13885 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MRB56_13885 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
AAA_lid_TRIP13_C
Motif
Other DBs
NCBI-ProteinID:
XNS32580
LinkDB
All DBs
Position
complement(3069849..3070544)
Genome browser
AA seq
231 aa
AA seq
DB search
MQPQPAFLLHRRPYRETSALVELLTLDHGRVRAVAQGMQRPGSRSRSQMQPFSPLHITWQ
GERELKRLRLVESRGTAAMLVGEGLLCGLYANELLTRLLPVEFAVPEVFAFYTSLLSELM
RPAERAPALRRLEVALLDALDAAPRFCTPDGDALDPQARYQYDTSSRAFVAASQGIDGRT
LRLLSHADWSEPGLAGVAKAVTRAALAPLLGDRPLRSRQLMQAMAQRRRAQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacagcccgcctttcttctgcaccggcgtccctatcgcgaaaccagtgcgctg
gtggaactgctgactctggatcatggccgggtacgggccgtggctcagggcatgcagcgt
cccggcagtcgttcgcgtagtcagatgcaacccttctcgccgctgcatatcacctggcag
ggcgagcgggagctcaagcgcctacgtctggtggagtcgcgcggaacggctgccatgctg
gtcggcgagggtcttctgtgtggtctgtatgccaatgaactgctgactcgcctgttaccg
gtggagtttgccgtgcctgaggtatttgccttctacacctcgctgctttccgagctgatg
cgcccggcggagcgtgcaccggccttgcggcgtctggaagtggcactgctcgatgcgctg
gatgcggctccgcgtttctgtactcccgacggtgatgcactggaccctcaggctcgctat
caatacgacacctccagccgtgcttttgtcgcggcttctcagggcatcgatggccgtacg
ctgcgtctgctgtcgcatgccgactggagtgaacccggtctcgcaggtgtcgccaaggca
gtgactcgcgccgcactggcaccactgttgggcgatcggccactgcgttcgcgacaattg
atgcaggccatggcccaacgtcgtcgagcgcagtga
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