Halomonas cupida: MRB56_14235
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Entry
MRB56_14235 CDS
T11149
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hck Halomonas cupida
Pathway
hck00541
Biosynthesis of various nucleotide sugars
hck01100
Metabolic pathways
hck01250
Biosynthesis of nucleotide sugars
Module
hck_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MRB56_14235 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hck01005
]
MRB56_14235 (kdsB)
Enzymes [BR:
hck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
MRB56_14235 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hck01005
]
Lipid A
MRB56_14235 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
IspD
Motif
Other DBs
NCBI-ProteinID:
XNS32649
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Position
complement(3152188..3152955)
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AA seq
255 aa
AA seq
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MQDFIVVIPARYASTRLPGKPLADIAGKPMVARVWEQARRSSAARVVVATDDPRIEAVLQ
PLGAEIVMTRDDHSTGTDRLAEVVEQLALGDDAIVVNVQGDEPLLPAELIDQVAARLIQD
EGASVATLAEPINDVETLFNANVVKVTRAMSGRALTFSRAPMPWDREGFREPPQMLSTDA
WLRHIGLYAYRAGFLRDFSQWMPAPIEQLEQLEQLRALYHGHAIQVALAEVTPPGGVDTQ
EDLERVRAWFAERDA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcattgtcgtgatcccggcgcgttacgcgtcaacgcgcctgcctggcaag
ccgctggcggatatcgctggtaagccgatggtggcgcgggtctgggagcaggctcgacgg
tccagtgcggctcgggttgtggtagctaccgatgacccgcgcattgaagcggtgctgcaa
ccgctgggcgccgaaatcgtgatgactcgtgatgaccactccactggcaccgatcgtctt
gccgaagtcgttgagcagttggcattgggcgatgatgccatcgtggtgaatgtgcagggt
gatgagcctctactgcccgcggaactgatcgaccaggtcgccgcgcgtctgattcaggat
gagggggcctcggtggccacgcttgccgagccgatcaatgacgtggaaaccctgttcaat
gccaatgtcgtcaaggtgacgcgcgccatgtccggccgtgccttgaccttctcgcgggcg
ccaatgccctgggaccgtgagggctttcgcgaaccgccacagatgttgagtaccgatgcc
tggctgcgtcacatcggcctgtatgcctaccgtgctggtttcctgcgtgacttcagtcag
tggatgccggcaccgatcgagcaactggaacaactcgagcagttgcgtgcgctctaccat
ggccatgcgattcaggtcgcgctggccgaggtgacaccgccgggcggtgtcgatacgcag
gaggatctggagcgggttcgggcctggtttgccgaacgtgatgcctga
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