Halomonas cupida: MRB56_17000
Help
Entry
MRB56_17000 CDS
T11149
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hck Halomonas cupida
Pathway
hck00071
Fatty acid degradation
hck00280
Valine, leucine and isoleucine degradation
hck00310
Lysine degradation
hck00362
Benzoate degradation
hck00380
Tryptophan metabolism
hck00410
beta-Alanine metabolism
hck00640
Propanoate metabolism
hck00650
Butanoate metabolism
hck00907
Pinene, camphor and geraniol degradation
hck00930
Caprolactam degradation
hck01100
Metabolic pathways
hck01110
Biosynthesis of secondary metabolites
hck01120
Microbial metabolism in diverse environments
hck01200
Carbon metabolism
hck01212
Fatty acid metabolism
Module
hck_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MRB56_17000 (fadB)
00650 Butanoate metabolism
MRB56_17000 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
MRB56_17000 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MRB56_17000 (fadB)
00310 Lysine degradation
MRB56_17000 (fadB)
00380 Tryptophan metabolism
MRB56_17000 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MRB56_17000 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MRB56_17000 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MRB56_17000 (fadB)
00930 Caprolactam degradation
MRB56_17000 (fadB)
Enzymes [BR:
hck01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MRB56_17000 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MRB56_17000 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MRB56_17000 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MRB56_17000 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
XNS33164
LinkDB
All DBs
Position
complement(3766916..3769081)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYQGNAITVARNGDDIAILTFDLKDGSVNKLSTAVVAELSEALEAVRSESGIKGLMLRS
AKEAFIVGADITEFHGMFEDGEAAIQAMLERVHGIFNGLEDMPFPTVTAINGLALGGGCE
VVLCTDFRVMSDTAKIGLPETKLGILPGWGGCVRLPRLIGADNAIEWIAGGTENRADACL
KVGAVDAVVPGDQLEAAALDILARANAGELDFEARRREKTSPLKLNSIEQMMAFETAKGY
VAGKAGPHYPAPVESIKVIQKGAGEGRERAQAIEAKSFGKLTQTDVSFNLVGLFMNDQVV
KKKGNEYMKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKEEAIELGLKEARKL
FGKQVERGRLTTDGMAQKLSNIRPTLSYGDFGHVDLVVEAVVENPKVKAGVLAEVEAQVS
ESTILASNTSTISITRLAENLKRPENFCGMHFFNPVHRMPLVEVIRGERTSDAAVAATVA
YARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEQGADFQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANEVMAEGFPDRMAQGGMNGGKTAIQVMFENDRLGQKNDKGFYAYEEDR
KGKPKKVSDEQAIELVKSLAANPREFSDEDIIARMMVPLCLETVRCLEDDIVGSAAEADM
ALIYGIGFPPFRGGALRYIDAMGLPEFVALADGLADELGALYAPTERLRQMANNGETFYA
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggcacgcaatggcgatgatatcgccatactg
accttcgacctcaaggacgggtcagtgaacaagctgtctacggcagtggtcgcggagttg
agcgaggcgctcgaagcagtacgctccgagagcggcatcaagggcctgatgctcagaagt
gccaaggaagccttcattgtcggtgcggacatcaccgagttccacggcatgttcgaagat
ggcgaggcagcgatccaggccatgctcgaacgtgtgcacggaatcttcaatggtctcgag
gacatgccgttcccgacggtcacggcgatcaatggcctggcgctgggcggaggctgtgaa
gtggtgctctgtaccgattttcgggtaatgagcgatacagcaaagatcgggctgccagag
accaaacttggcattcttcccggctggggcggctgtgtccgtctgccacgcctgatcggt
gccgacaacgccatcgagtggatagccggtggcacggaaaatcgtgctgacgcctgtctc
aaggtcggtgctgtggatgcggtggtgcccggggaccagctcgaggcggccgcattggac
attctggcgcgcgccaatgccggtgagttggatttcgaggcacgacgtcgtgaaaagacc
agtccgctgaagctcaactccatcgaacagatgatggccttcgagaccgccaagggctat
gtcgccggcaaggccggtccgcactacccggcaccggtggaatcgatcaaggtcattcag
aagggcgccggcgaaggtcgtgagcgtgcccaggccatcgaggcaaagagcttcggcaag
ctgacgcagactgatgtcagctttaacctggtcggcctgttcatgaatgatcaggtggtc
aagaagaagggcaatgaatacatgaaacaggcccagccggtgaagcagaccgccgtgttg
ggtgctggcatcatgggtggcggcattgcctatcagagcgcctcgaaaggcactcccatc
ctgatgaaggacatcaaggaagaggccattgagctggggctgaaggaagcccgcaagctg
ttcggcaagcaggtcgagcgtggtcgcctgaccacggatgggatggcacagaagctttcc
aatattcgcccgaccctgtcctatggcgacttcgggcacgtcgacctggtggtcgaggcg
gtggtcgagaaccccaaggtcaaggctggggtcctggcggaagtcgaggcccaggtgtcc
gagtccaccattctggcgtccaatacctcgaccatttccattacccgtctggccgagaat
ctcaagcgccccgagaacttctgcggcatgcacttcttcaacccggtgcatcgcatgccg
ctggttgaagtcattcgcggcgaaaggaccagcgatgccgcggtcgctgcaaccgtggcc
tacgcccgagccatgggcaagacaccgattgtggtcaatgattgcccgggattcctggtc
aaccgtgtgctgttcccctacttcggtggcttcagcctgctggttgagcagggcgcggat
ttccagcgtgtcgacaaggtcatggagaagttcggctggccgatgggcccagcctacctg
ctggatgttgtgggtatggacaccgcagtgcatgccaacgaagtgatggcggaaggcttc
ccggaccgcatggctcagggtggcatgaatggcggcaagaccgcgattcaggtgatgttc
gagaatgatcgtctcggtcagaagaatgacaagggcttctacgcctacgaggaagatcgc
aagggcaagccgaagaaggtcagcgatgaacaggccatcgagttggtcaagtcgttggca
gccaacccccgtgaattcagcgacgaagacatcattgcacgcatgatggtaccgctgtgc
ctcgagacggtacgttgtctggaagacgatattgtcgggagtgccgctgaagcggacatg
gcgctgatctacggcattggcttcccgcccttccggggtggcgcgctgcgctacatcgat
gccatggggctgcccgagttcgtggcactggctgatggactggccgatgaactcggcgcg
ctgtatgcgccgaccgagcgtctgcgccagatggccaacaacggcgaaaccttctacgcc
agataa
DBGET
integrated database retrieval system
