Halomonas cupida: MRB56_18955
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Entry
MRB56_18955 CDS
T11149
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hck Halomonas cupida
Pathway
hck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MRB56_18955 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hck03400
]
MRB56_18955 (recC)
Enzymes [BR:
hck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MRB56_18955 (recC)
DNA repair and recombination proteins [BR:
hck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MRB56_18955 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF1737
Motif
Other DBs
NCBI-ProteinID:
XNS36908
LinkDB
All DBs
Position
4199709..4203344
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AA seq
1211 aa
AA seq
DB search
MVVHGNRLESLRELAVEWLRRHPLTPLENEVLLVQSNGISQWLKLALAADPQDGGCGIAA
ALDVTLPARFLWQAYRTVLTELEGPGAVPPTSPFDKSRLTWRLMRVLPALLEDDAFAPLR
RYLEDDGDQRKRHQLAERLADLFDQYQVYRGDWLEAWSNQDDVLIDARGQVSPLAEDQRW
QAILWRALRDDTGEAGIASSRSGVHQRFVAACQSLDQTIPPAGLPRRIVVFGISSLPSQT
LEALAALSRVSQVVLFVHNPCEFYWADIIEHRDLLRAARRRQQQRPGMPLNLDDSQMHLH
AHPLLAAWGKQGRDYLRLLDEFDEHHRYAELFEQEALRIDLFEPHTDADGHQRLLHQLQD
DIRALRPLAETRERWPAVSADDDSLAFHIAHGPLREVEILHDQLLAAFSNDPSLKPRDIL
VMVPDIDTYAAAVSAVFGRLEADDPRFIPFTVSDQQSRHRQPLAIAVETLMRLPELRLSV
SNLMDLLEVPGVRQRFGIDEQDLALIERWVAGAGIRWGLDAGQRASLDLPGGLEQNTWAF
GLKRMLLGYAVGSGGSGWHDIAPYEDIGGLDAALAGPLVQLAETLEHHWHALSHPASVDD
WCQRLRALLDDCLVAVDDADSALLGRLDQSLEEWQASAEEAGFEEAVPLTVVREQWLAAL
DHSSLSQRFLAGAVNFATLMPMRAIPFRHVWLLGMNDGDYPRTQIPQDFDLMGHDYRPGD
RSRREDDRYLFLEALLSARERLAISWVGRSIHDNTERPPSVLVGQLRDHLAHGWLPAGSP
SHDNQNSLDSQSSSDNPDRHDDQGQDNQIHDNQGGELLLAQLTTEHPLTPFSPRYFKGIP
RLFSYAHEWRQVHDASSQEQASATDELSLGDWQPAAPLPLATLSRVLEDPVAAFFQQRLG
VQLQLPESGRLDHEPFALDGLEHWQLQDALIHAQRRAIDEGSPRQQALATTLERLTAEGR
LAMGGFAERMRQDLVESMDDLFTLYEEALTTWPHAHQTPTPFSLSLPGLIIEDAIDELRE
STEGDRCRVILSTSSLVRQGRYNWRHWLRPWLTHLVMQLNLGPTTTRLLSRTGNGSLLPM
PASEARELLESIAISYRCALQEPLPLARDSAFGWLRRGGTPAAMQRWLSGQFEDSDEKAI
NEATRILVGNAFQPGEYQRNLYLQRQWPDPLELLRTHGLRFAELAEQFYGPLSRHLQSGT
PDKSSRREASL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgcatggcaatcgtctcgagtcactgcgtgaactggcggtggagtggctacgt
cgacatccgctgactccgctggaaaacgaggtgctgctggtccagagcaacggcatcagc
caatggctcaagctggcactggcggcggacccgcaggatggcggctgcggaatcgccgcc
gcgctggacgtcacgctcccggcgcgtttcctctggcaagcctaccgcacggtgctgacc
gaactggaaggtcccggagcggtacctccgacctcccccttcgacaagtcacgcctcacc
tggcgattgatgcgggtgcttcccgccctgctcgaggatgatgcctttgctcccttgcgg
cgctatctcgaggatgacggggaccaacgcaagcggcatcaactggccgagcgcctggcc
gacctctttgaccagtatcaggtctatcgcggcgactggctggaagcctggtccaaccag
gatgatgtgctgatcgacgcgcgtggccaggttagtccattggccgaggaccagcgctgg
caggccatcctctggcgagccctgcgtgatgacactggtgaggcaggtattgcctcgagc
cgctccggcgtacaccaacgcttcgtcgctgcctgccagtcactggaccagaccattcca
ccagcggggctgccacgacgcattgtggtattcgggatttcctcgctgcccagtcagacc
ctggaagcactcgccgctctgtcccgcgtcagccaggtagtactgttcgttcacaacccc
tgcgaattctactgggccgacatcatcgagcaccgcgatctattgcgcgcggcgcgacgc
cgccagcaacagcgtccggggatgccactgaatctcgacgacagccagatgcacctgcac
gcccacccactactcgccgcctggggtaagcaagggcgtgactacctgcgcctgctggat
gaattcgatgaacaccaccgctatgccgagctgttcgaacaggaagcgctgcgcattgac
ctcttcgagccacataccgatgctgatggccaccagcggctactgcatcagttgcaggat
gatatccgagccctgcggccactggcggaaacccgcgaacgctggccggccgtttcggcc
gatgacgactccctggccttccatattgcccatggtccgctgcgcgaagtggaaattctc
cacgaccagttgctggcggcgttcagcaacgacccgagcctgaagccccgcgatattcta
gtgatggtgccggatatcgacacctacgccgccgccgtcagcgcggtcttcgggcgcctc
gaggcggacgacccccgattcattcccttcaccgtctccgatcaacagagtcgacatcgt
cagccactggccattgccgtggaaactctcatgcgcctgcccgagctacggctttcggtc
agcaacctgatggaccttctcgaggtgcccggagtacgtcagcgcttcggtatcgacgag
caggatctggcgctgatcgaacgctgggtggcgggggccggtattcgctggggactggat
gcggggcagcgagccagcctcgatctgcccggcgggctcgagcagaacacctgggccttc
ggcctcaagcgcatgctgctgggttatgccgtaggcagcggtggctcgggctggcacgat
atcgctccttatgaggacatcggtggcctcgatgccgctcttgccggcccacttgtgcaa
ctggccgagaccctggagcaccactggcatgccctcagtcatccggccagcgtcgatgac
tggtgtcagcgcctgcgggcactgctcgacgattgtctggtcgctgtggatgatgctgac
agtgccctgctcggacgcctcgaccagtctctggaggagtggcaggcatccgccgaggaa
gcgggattcgaggaagccgttccactgaccgtggtgcgcgagcaatggctggcagcgttg
gatcacagtagtctgtcccagcgctttctcgccggggccgtcaactttgccaccttgatg
ccgatgcgcgcgatccccttccgccacgtctggctgctgggcatgaacgacggcgactac
ccacgcacccagatccctcaggatttcgatctgatgggccacgattaccgccccggtgac
cgctcacgccgcgaggacgaccgctatctgtttctcgaggcactgctgtcggctcgcgag
cggctggccatcagttgggtcgggcgcagtattcacgacaacaccgagcgtcctccttca
gtactggtgggacaactgcgcgaccatctggcccatggctggcttcctgccggttccccc
agccacgacaaccagaacagtctcgatagccagagcagctccgacaacccggaccgtcac
gatgatcaggggcaagacaaccagattcatgacaaccagggcggcgaactcctgctggca
cagttgaccaccgaacacccgctgacgcccttcagcccacgctacttcaagggcatccca
cgcctgttcagttatgcccacgaatggcgtcaggttcatgacgcctcttctcaagagcag
gcgtcagcaacggatgagctgtcactcggcgactggcaaccggccgcgcccctgccattg
gccactctgtctcgggtacttgaggacccggtggcggccttcttccagcaacgtctcggc
gtacagctccaattgcccgagagtggccgtctcgatcatgaacccttcgctcttgatggc
ctggaacactggcaactgcaggatgccctgatccatgcccagcgccgcgccatcgatgag
ggcagtcctcgccagcaggcactggccacgacgctcgaacgcctgacggcagaggggcgt
ctggccatgggcggcttcgccgagcgcatgcggcaggatctggtcgagtccatggatgac
ctgttcacgctctatgaagaagccctgaccacctggccccatgctcaccagacgccaacc
cccttcagcctgtcgctgcccggtctgatcatcgaggatgccatcgatgaactgcgcgag
agtaccgagggtgaccgctgccgagtgatactgagcacctcaagtctggtgcgccagggt
cgctacaactggaggcactggctgcgcccctggctgacgcacctggtcatgcaactgaac
ctcggccccaccaccacccgactgctgtcccgcaccggcaacggtagtctgttgccgatg
cccgccagcgaagcccgcgaactgctcgagtcgattgccatcagttaccgctgtgccctg
caggagcctctgccactggcccgtgacagcgctttcggctggctgcgtcggggcggcaca
cctgcggccatgcagcgctggctcagtggccagttcgaggacagcgacgaaaaggccatc
aacgaggcgacccgaatcctggtcggtaacgcctttcaacccggcgagtaccaacgcaac
ctctacctgcagcgccagtggcctgacccgctggagctactgcggacccatggtctgcgt
tttgccgagttggccgagcagttctatgggccgctcagtcgccatctgcaatccgggaca
cccgacaagtcatccagacgggaggcctccttatga
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