Halomonas cupida: MRB56_19520
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Entry
MRB56_19520 CDS
T11149
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hck Halomonas cupida
Brite
KEGG Orthology (KO) [BR:
hck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hck03009
]
MRB56_19520 (rsmB)
Enzymes [BR:
hck01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
MRB56_19520 (rsmB)
Ribosome biogenesis [BR:
hck03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MRB56_19520 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
Methyltr_RsmF_N
FtsJ
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
XNS33628
LinkDB
All DBs
Position
4328084..4329460
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AA seq
458 aa
AA seq
DB search
MTHDTSASERPRSRRNGPNTNAKGDCVRAAAARALVPVITGKGSLSGLEDHQVVARDRAL
FKAMCYGTCRTLPRLEALAAKLLEKPFKTRDADVQALLLLGIFQLLYLRIPAHAAVGETA
GAARLLGKAWATRVLNGCLRRLQREAFSLEAEVDKDQAVALLHPRWWVKAIRDAWPDDWQ
AILEANNQPGPMTLRVNRRHNDRESYIDVLDGAGVSARLCAHAPDGLTLDKSMDVEALPG
FAQGHVSVQDEAAQLATVMLGPVIAPRPGARVLDACCAPGGKSAHLLELFDIELQAIDSD
AQRLARVEDTLSRLGLSARLAQGDATERDWWDGTQFDAILLDAPCSGSGVIRRHPDIKRL
RRQSDIAQLAELQSRLLDNLWGLLKPGGTLLYATCSVLPQENRDQVAAFLERTSDAQLNM
PEGIGWGRDAAPGRQLLPVPDSHDGFFYARLVKSGSDQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgacacttccgcctccgagcgtcctcgctccagacgcaacggccccaacacc
aacgccaagggcgactgtgtgcgtgccgccgcagccagagctctggtaccggtcatcacc
ggtaaaggatcgctgagcggtctcgaggatcatcaggtagtggcacgtgaccgtgccctg
ttcaaggccatgtgctacggaacctgccgtaccctgccgcgccttgaggcgcttgccgcg
aaactgctcgagaagcccttcaagacccgcgatgccgacgtccaggccctgttgctgctg
ggcatcttccagttgctgtacctgcgcataccggcacatgcggccgtgggcgagaccgcc
ggtgccgcccgccttctcggcaaggcctgggcgacccgcgtactgaatggctgcctgcgt
cgtctgcagcgggaagccttcagcctcgaggccgaagtcgacaaggatcaggccgtggca
ctgctgcacccacgctggtgggtcaaggctatccgcgacgcctggccggacgattggcag
gccatactcgaggccaacaaccagcccggccccatgacgttacgcgtcaatcgccgccac
aatgaccgtgagagctatattgatgtgctcgatggcgccggagtctcggcacgcctgtgt
gcccatgcaccggatggactgaccctcgacaagtccatggatgtcgaggcactgccgggg
ttcgcccagggccatgtcagtgtgcaggacgaagcggcacagctggcgaccgtcatgctc
ggcccggtgatagcaccgcgccccggtgctcgtgtgctcgatgcctgttgtgcgccgggc
ggcaagagtgcccacctactcgagttgttcgacatcgaactgcaggccatcgactcggac
gcccagcgcctggccagggtcgaggacaccctgtcccgcctggggctgtcagcgcgactg
gctcagggcgatgccaccgagcgtgactggtgggacggcacccagttcgacgccattctg
cttgatgctccctgttccggtagcggggtcatccgtcgccacccggatatcaagcgtctg
cgtcgacaatcggatatcgcccagctcgccgaattgcagtcacgtctgctggacaacctc
tgggggctgctcaagcccggcggcaccctgctctacgccacctgctcggtcctcccccag
gagaaccgcgaccaggttgccgccttcctcgagcgcaccagcgacgctcagctcaacatg
cctgaaggtatcggctgggggcgcgatgccgcaccggggcgccagctgttgccggtcccg
gacagtcatgacggcttcttctacgcacggttggtgaaaagcgggtcggatcagtaa
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