KEGG   Halomonas cupida: MRB56_21445
Entry
MRB56_21445       CDS       T11149                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hck  Halomonas cupida
Pathway
hck03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hck00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MRB56_21445 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hck02044]
    MRB56_21445 (tssH)
Secretion system [BR:hck02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   MRB56_21445 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small Clp_N AAA_16 AAA_22 nSTAND3 TniB NBD_SMAX1 ATPase_2 Sigma54_activat AAA_14 AAA_7 IstB_IS21 Zeta_toxin NACHT AAA_24 T2SSE SLFN-g3_helicase Hpr_kinase_C DUF3782 GrpE YlqD V_ATPase_I
Other DBs
NCBI-ProteinID: XNS34001
LinkDB
Position
complement(4763280..4765910)
AA seq 876 aa
MSLKTLFAKLNDVSRGAMEEAAGLCLAKRQYEVDIEHLLLKLIDADDNDVLRIARHYELA
LDRLADQLDRSLETFKTGCTRTPALSPHITRLIERAWVIASIDQDMGLVRSGHLLLALLS
DQELRRVVSDSAPELDQLDADDLRLNFEDLLAASPEQQSVETAASQQSGKTGGGGKRGGK
TPALDQYTINLTANAREKRIDPVLGRDAEVRQMIDILTRRRQNNPILTGEAGVGKTAVVE
GLALKIVAGAVPEALANVELRTLDLGLLQAGAGVKGEFEERLKNVIEEVKRSLHPIILFI
DEAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVK
VEEPSEDVAIDMLRGLAGRMRDHHGVEVLDDAVVQAVRLSHRYISGRQLPDKAVSVLDTA
CARVALGQAVAPAQLEDARQRRLDLEAEQTVLRHERERGERAHDERLAELDEQLVELSEQ
IEALEARWQQQRDSVATIREVEQQLAQASDDAGRESAREALLEARQQLETLAGDEPLVHA
CVDGNAIGAVVAAWTGIPLGKMQRDEIDTVRRLPQLLSERVIGQDHGLVEIGKRISLSRA
KLEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLVTINMSEYQEAHTVSSLKGS
PPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVMDDGEGREIDF
RNCVILLTSNVGTDWIMQRCLGAEAYPDPEELVEEMRDSLNAVFKPAFLGRLKIVPFYPV
QGEVLTRIVNLKLARLAQRFEINHGAQLSFAPELSEHIAERCTQTDSGARSIDHLLTGAL
MPELAEQVLERMAEDTPIDSIQVGVDEHSDFTYRME
NT seq 2631 nt   +upstreamnt  +downstreamnt
gtgagcctcaagacactatttgccaagctcaacgatgtcagccgcggcgcaatggaagag
gccgctgggctgtgtcttgccaaacgccagtacgaggtcgacatcgagcatctgctgctc
aagctgatcgatgccgatgacaacgacgtcctgcgcatcgcacggcattacgagctggcg
ctggatcgccttgctgatcaactggatcggtcgctcgagacattcaagaccggttgtacg
cggacgccggcgttgtcaccgcatattacccgcctcatcgagagggcctgggtgattgcc
tcgatcgatcaggacatgggcctggtgcgcagtggccatctgctgctggcgctgctcagc
gatcaggagctgcgccgtgtggtcagcgatagtgctccggagctcgaccagctcgatgcc
gatgatctgcgtctcaatttcgaggatcttctggcagcgagccccgagcagcagtcggtg
gagacagcggcttcgcagcagtccggcaagactggcggtggaggaaagcgtggtggcaag
acgccagcacttgaccagtacaccatcaacctgactgccaacgcccgggagaagcgcatc
gacccggtgctgggacgtgatgccgaagtccgccagatgatcgatatcctgacgcgtcgt
cggcagaacaacccgatcctgaccggcgaggccggggtcggcaagacggctgtcgtcgaa
gggttggcgctgaagatcgtggccggcgccgtgcccgaagcgctggccaatgtggagttg
cgtaccctcgacctcggcctgctgcaggccggggctggcgtaaagggggagttcgaggag
cgcctcaagaacgtcatcgaggaggtcaagcgcagcctgcacccgatcatcctgttcatc
gacgaggcccacaccctgatcggcagtggcggtcaggcaggccagaacgatgccgccaat
ctgctcaagccggcgctggcgcgtggtgagctgcgtaccatcgccgcaacgacctgggcc
gagtacaagaagtacttcgagaaggatgctgcgctggcgcggcgtttccaggtggtcaag
gtcgaggagcctagtgaggatgtcgccatcgacatgctgcggggtctcgcgggccgcatg
cgcgaccaccacggcgtcgaggtgctcgatgatgcagtggtgcaggccgtgcgcctgtcg
catcgctacatcagcggccgtcaactgccggacaaggcggtcagcgtactcgataccgcc
tgcgcccgtgtggcgctgggccaggccgtagctcccgcccagctcgaggatgcccgtcag
cggcgtctggatctcgaggcggagcagacggtgctgcgccacgagcgagagcgtggcgag
cgcgcccatgatgaacggctggccgagcttgacgagcaactggtcgagctgagcgaacag
atcgaggcgctggaagcccgttggcaacagcagcgtgactccgtcgccaccattcgtgaa
gtcgagcagcaactggcacaggccagcgatgatgcggggcgggaaagtgcccgtgaagcc
ctgctcgaggcacgtcagcagctcgaaacgctggccggtgatgagccgctggtgcatgcc
tgtgtcgatggcaacgctatcggagccgtggtggccgcctggacgggtatcccgctgggc
aagatgcagcgtgacgagatcgacaccgtgcgtcgcctgccgcaactgctgtcagagcgg
gtcatcggtcaggaccatggcctggtcgagatcggcaagcgcatcagcctgtcccgggcg
aagctcgaggaccccaacaagccgattggtgtgttcctgctgctcggccccagtggtgtc
ggcaagaccgaaaccgctctggcactggccgacactctctatggcggtgaacgcaatctg
gtcaccatcaatatgtcggagtaccaggaagcccatacggtgtcgtcgctcaagggctct
ccgcccggctatgtcggctatggcgagggtggggtgttgaccgaagcggtgcgacgcaaa
ccctacagcgtggtgttgctggatgaggtggagaaggcgcaccccgatgtgctcgaactg
tttttccaggtgttcgacaagggcgtcatggacgacggcgaggggcgcgagatcgacttc
cgcaactgcgtcatcctgctgacttccaacgtcgggaccgactggatcatgcagcgctgt
ctcggcgccgaagcctaccccgaccccgaagaactggtcgaggagatgcgcgacagtctc
aatgccgtgttcaagccggccttcctcggccgcctcaagatcgtgcccttctatcccgtt
cagggcgaagtgctgacgcgcatcgtcaacctcaagctggcgcgcctggctcagcgtttc
gagatcaaccacggtgctcagctgagctttgcgccggagttgtccgagcacatcgccgag
cgttgcacccagaccgacagcggggcgcgcagtatcgaccatctgctgaccggcgccctg
atgccggagctggctgagcaggtgcttgagcgcatggccgaggacacgcccatcgacagc
atccaggtcggggtagatgagcacagcgacttcacctatcgcatggaatga

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