KEGG   Helicobacter cholecystus: NCTC13205_00012
Entry
NCTC13205_00012   CDS       T06600                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hcl  Helicobacter cholecystus
Pathway
hcl00300  Lysine biosynthesis
hcl00470  D-Amino acid metabolism
hcl01100  Metabolic pathways
hcl01110  Biosynthesis of secondary metabolites
hcl01120  Microbial metabolism in diverse environments
hcl01230  Biosynthesis of amino acids
Module
hcl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hcl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCTC13205_00012 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC13205_00012 (lysA)
Enzymes [BR:hcl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NCTC13205_00012 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: VEJ23893
LinkDB
Position
1:8852..10060
AA seq 402 aa
MDFLSLAKTYQTPLYVYDFDKIQKNFLEFKNAFAGRKSLICYALKANSNLSLIAHLASLG
AGADCVSIGEVKRALLAGIPRYKIIFSGVGKRDDEIKEALKEDILFLNLESYEEMRRVES
IAHSLGVKARISVRVNPNIDAKTHPYISTGLYENKFGVELEVAKEMYLCAKASKYLQAVG
VHFHIGSQICDLGAITQAAQKIAEFLKSLLALKLEIKFFDIGGGLGIRYENEEIIKLYDY
AQSILSSLKDCEPTIICEPGRRIVGDSGYFLTQVIGEKRNKHKRFVIVDGGMNDFIRPSL
YQASHNSFVVGKENEDTLECDIVGPICESGDYLAKNTQLPLTQIGDLIVFKDAGAYGYTM
ASNYNTRPRPAEVAMMNQKVKLIKNRENLQSLWADEWELLKS
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggattttctctctctcgccaaaacctatcaaactccgctttatgtgtatgattttgac
aagatacaaaagaattttttagaatttaaaaatgcttttgcagggagaaaatcactgatt
tgctatgcactgaaagctaattctaatctttccttaatcgctcatcttgcctctcttgga
gcaggagcggattgtgtgtctattggggaggttaaacgcgccttgcttgctggaatccca
agatataaaattatctttagtggtgtaggtaaaagagatgatgagatcaaagaagctctc
aaagaggatattttatttctcaatcttgaaagctatgaagaaatgcgtagggtagagagt
atcgctcactctttaggggtaaaagctagaatttcagtgcgggttaatcccaatatcgat
gctaaaacccacccctatatttctacagggctttatgaaaataaatttggcgtagagctt
gaggtggcaaaagaaatgtatctttgtgctaaggcttctaaatatcttcaagcagtgggt
gtgcattttcatatcggttctcaaatctgtgatttgggtgcaattacacaggctgctcaa
aagattgcagagtttttaaaatcacttctagcccttaaacttgaaattaagttttttgat
attggagggggtttggggatacgctatgaaaatgaagagattattaagctttatgattat
gcccaaagcatactctctagccttaaagattgtgaacctacaattatatgtgagccaggg
agaaggatagtaggggatagtggatattttcttactcaagtgattggagaaaaacgcaat
aagcataaacgttttgtcattgttgatggaggaatgaatgattttatacgcccctcactt
taccaagcttctcataactcttttgtagtggggaaagagaatgaagatactttagagtgt
gacattgtaggaccaatttgtgagagcggggattatctggccaaaaatactcagcttcca
ctcactcaaattggggatttgattgtgtttaaggatgctggggcttatggatacactatg
gcaagcaattataatactcgcccacgtcctgcagaagttgcaatgatgaatcaaaaagtc
aaacttattaaaaatagagagaatttacaatctttgtgggcagatgagtgggagctttta
aaatcatga

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