Helicobacter cholecystus: NCTC13205_00040
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Entry
NCTC13205_00040 CDS
T06600
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcl03016
]
NCTC13205_00040 (truB)
Enzymes [BR:
hcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13205_00040 (truB)
Transfer RNA biogenesis [BR:
hcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13205_00040 (truB)
Prokaryotic type
NCTC13205_00040 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
VEJ23917
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All DBs
Position
1:42770..43600
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AA seq
276 aa
AA seq
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MNALFATYKPAGVSSNHFLMKLKRKYQFLKCGYSGTLDPFASGLLLVGVGSYTKLFDYLD
KSIKSYETTLWLGVESESLDIERIESVKCVKELDRDRVNEILKSFIGKIKYIPPKFSAKH
IKGKRAYELARSGIEFELQECEMEIFAIELLSYNHPFISFRVEVSEGAYIRSLGEMIAQR
LGVKGALSALKRVGEGSVKIEREEIKPLDIFSHLTPKRISLDEYKCDFKNGKKIKLKNQN
LLIHTPYLVIFDDFFSIIEINKNQEVKYRLNRMPRC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctctttttgcgacatataagcctgcaggagtgagcagtaatcactttttaatg
aagttaaagagaaagtatcaatttcttaaatgcggatattctggaacgcttgatcctttt
gcctcaggacttttgcttgtgggggttggaagttatactaagctctttgactatttggat
aagagcatcaaatcttatgaaactacgctttggctaggggtggagagtgagagtttggat
attgagcgtattgagagtgtgaagtgtgttaaagagctagatagagatagagtgaatgag
atcttaaagagttttataggaaaaattaaatatatacctcctaagtttagtgccaagcat
attaagggtaaaagagcttatgaattagcaagaagcggaatagaatttgaattgcaagag
tgcgaaatggagatttttgcaatagaattgctctcctataatcacccttttataagtttt
agggtggaagtgagtgaaggggcatacattagaagtttgggtgagatgattgctcagaga
ttgggagtaaaaggagctttaagtgcattaaaaagagtgggtgaggggagtgtgaaaata
gaaagagaagagatcaaaccgcttgatattttctctcatcttacacctaaaagaatttct
ttagatgaatacaaatgtgattttaaaaatggaaaaaaaataaaattaaagaatcaaaac
cttttaatccatacaccttatttggttatttttgatgattttttctctataattgaaatt
aataaaaatcaagaagtcaaatatcggttaaataggatgcctagatgctaa
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