Helicobacter cholecystus: NCTC13205_00063
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Entry
NCTC13205_00063 CDS
T06600
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00220
Arginine biosynthesis
hcl00240
Pyrimidine metabolism
hcl00250
Alanine, aspartate and glutamate metabolism
hcl01100
Metabolic pathways
hcl01110
Biosynthesis of secondary metabolites
hcl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NCTC13205_00063 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC13205_00063 (carB)
00220 Arginine biosynthesis
NCTC13205_00063 (carB)
Enzymes [BR:
hcl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NCTC13205_00063 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_2
ATP-grasp_5
PylC-like_N
Pyr_redox
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
VEJ23940
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Position
1:complement(62467..65733)
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AA seq
1088 aa
AA seq
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MPKREDIKNILLIGSGPIIIGQACEFDYSGTQAAKTLKELGYKVTLVNSNPATIMTDPEF
ADRTYIEPITEEILSDIIQKENIDAILPTMGGQTALNIAMSMEEKGLLKGVKFLGANPQA
IKKGEDRQAFKEAMLKIGMDLPKSRYAYNEEEALHAAKEIGFPLIIRASFTLAGGGSGVA
YNIDEFKLLAKNGLDASPINEILIEESLLGWKEYEMEVIRDKNDNCIIVCSIENLDPMGV
HTGDSITIAPALTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAINPQSGRMIVIEMNP
RVSRSSALASKATGYPIAKIATLLAVGFTLDEIKNDITGTTASFEPSIDYIVSKIPRFTF
EKFPTADSTLTTSMKSIGEVMAIGGSFAESIQKALCSLENGLFGFNPISSDIEKIKHEIR
RPNDSRLLYIAEGFRHGLSLEEIYSLSNIDRYFLSQIQEITSFESKINTEILQNYSLMQE
AKSLGFSDKMIAYLINKNDGLEINQNEVYQARKELNLPLNYYEVDTCAAEFPSLTPYLYS
SIGRFSPITQELQIKEEEKKKVMIIGGGPNRIGQGIEFDYCCVHASFALKDLGITSIMYN
CNPETVSTDYDTSDILYFEPIDFEHVRSVIERENPDGIIVHFGGQTPLKLAKELTRIGAK
IIGTTAKVIDTAEDREKFAEFVEANNLKQPQNGIAFNKEEAHSIASKIGFPVLVRPSYVL
GGRAMRIVHNDEELRAYMEEAVKVSESSPVLVDKFLDRAIELDIDAISDGENVYIGGIMQ
HIEEAGIHSGDSASSLPPFSLSNDLISQIQKITTQIALKLGVVGLMNVQYAIHHNQIYLI
EVNPRASRTVPFVSKATGMPLAKIATRVMVQGNLPEALKFYDHFNILEYKDGIYQHKTLK
HIALKESVFPFNKLNGADVLLGPEMKSTGEVMGISQNFGISFAKSQIACKNTLPTSGKIF
ISLQDLDKPFAASLAKDFISLGFSICSTGGTHKAITDAGVECESILKVSEGRPNIQDAIT
NHQIAMVINSSDERSNKSDTRLLRQQVLKSQVPYFTTIEEAKAACSAIKELSANSPYSAK
ALQDFLRS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgagaagatataaaaaatattttgctaattggttcaggaccgatcattatc
ggacaagcttgtgaatttgactactcaggaactcaagctgctaaaacgcttaaagagtta
ggatataaagttacccttgtcaattccaatccagctacaattatgactgatcctgaattt
gcagatagaacttatattgaacctattactgaagaaatccttagcgatattatccaaaaa
gaaaatattgatgccattcttcctacaatgggaggacaaactgccttaaatattgcaatg
agtatggaagaaaaaggattgcttaaaggtgtgaagttcctaggagctaacccacaggca
attaaaaaaggggaggatcgccaagcctttaaagaagccatgctcaaaatcggtatggat
ttaccaaaatctcgatatgcctataatgaagaagaggctcttcatgctgccaaagaaatt
ggattccctctaattatccgagcaagtttcactcttgcaggaggtggaagcggtgtggct
tataatattgatgaatttaaacttctagcaaaaaatgggttagatgcctcacctattaat
gaaattctcattgaagaatcgcttctaggatggaaagaatatgaaatggaagtcattcgt
gataagaatgataattgcatcattgtatgttccatcgaaaatcttgatcctatgggtgtg
catacaggagacagtatcactatcgcccccgccctaaccctaactgataaagaatatcag
agaatgagggatgcctcatttgcaattttgcgagagattggcgtagatacaggagggagc
aatgtccaatttgccataaatcctcaaagtggaagaatgattgttattgagatgaatcca
cgggtttcacgatcttctgctcttgcaagtaaggctacaggttaccctattgctaaaatt
gccacacttctagcagtaggttttactcttgatgaaattaaaaatgatatcacagggaca
acagcaagttttgaaccaagcattgattatattgtaagcaaaatcccacgcttcacattt
gagaaatttcccacagcagattctaccctcacaacaagcatgaaaagcattggggaagtt
atggctattggagggagttttgctgaaagtattcaaaaagcactttgtagtctagaaaat
ggtctttttggttttaatcccattagctcagatatagaaaaaatcaaacatgagatcaga
cgtcccaatgattctagacttctctacattgctgaggggtttagacatgggttaagtctt
gaagagatttattctctaagcaacattgatcgctatttcctctcccaaatccaagaaatc
acttcctttgaatcaaaaattaatacagaaatcctgcaaaactactctcttatgcaagag
gccaaatcattgggctttagtgataaaatgattgcctatcttatcaacaaaaacgatgga
ttggaaattaatcaaaatgaagtctatcaagcacgtaaagagttaaatctgcctttaaat
tattatgaagttgatacttgtgctgcagaattcccttccctcacaccctatctttactct
tctattggtcgcttctctcctatcacacaagaacttcaaattaaagaagaagaaaagaaa
aaagtgatgattattggagggggtcctaatcgtatcggacaggggattgagtttgattac
tgctgtgttcatgcctcttttgcactcaaagatttgggaataacaagcattatgtataac
tgcaaccctgaaacagtgagcacagattatgatacaagcgatattctctactttgaacct
attgattttgaacatgtaagaagtgtgattgaaagagagaatcctgatggaattattgta
cattttggaggacagacccctcttaaacttgccaaagaacttacaagaattggtgcaaaa
atcattggaaccacagccaaggtcattgatacagcagaagatagagagaaatttgcagag
tttgtggaagccaacaacctcaaacagcctcaaaatggcattgcattcaataaagaagaa
gcccatagtatcgcaagtaagattggattccctgttcttgttcgtccaagttatgtatta
ggagggagagcaatgagaattgtgcacaacgatgaagagcttagagcctatatggaagaa
gctgttaaagtgagtgaaagttctcctgtgcttgtagataaattccttgatcgggctatt
gagttagatatcgatgccattagtgatggagagaatgtatatatcggggggattatgcaa
catattgaagaagcagggatacactccggtgatagtgcctcttctctccctcccttctca
ctctctaatgaccttatctctcaaatccaaaaaatcaccactcaaattgcactcaaactt
ggtgtagtgggattaatgaatgtgcaatatgctatccaccataatcaaatctatctgatt
gaagtcaatccaagagcaagccgaaccgtgccttttgtcagcaaggccacaggaatgcca
ctcgcaaaaattgcaacaagagtgatggtgcaaggcaatcttcctgaagcacttaaattt
tatgatcacttcaatatcttagagtataaagatgggatctatcagcataaaacccttaaa
cacattgccttaaaagaatctgtctttccttttaataaacttaatggtgcggatgtcctc
ttgggccctgagatgaaaagcactggagaagtcatggggattagtcaaaattttggaatt
agctttgcaaaaagtcaaattgcttgtaaaaatacacttcctacaagcggaaagattttt
atctctctacaagatttagataagccctttgcggcctcccttgcaaaagatttcatctct
cttggctttagtatctgctccacaggtggcacacataaggcaatcactgatgcaggagta
gaatgtgaatctatattaaaggtaagcgaaggacgaccaaatattcaagatgctatcaca
aaccaccaaattgcaatggtgattaatagcagtgatgagcgaagcaataaaagtgacaca
cgacttttacgtcagcaagtactcaaatcccaagtgccctattttacaaccattgaagaa
gcaaaagccgcttgcagtgcgattaaagaactctcagccaatagtccctattctgcaaaa
gcgctgcaagatttcctaagaagctaa
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