KEGG   Helicobacter cholecystus: NCTC13205_00128
Entry
NCTC13205_00128   CDS       T06600                                 
Symbol
hsdR_1
Name
(GenBank) type I restriction enzyme restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hcl  Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:hcl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcl02048]
    NCTC13205_00128 (hsdR_1)
Enzymes [BR:hcl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NCTC13205_00128 (hsdR_1)
Prokaryotic defense system [BR:hcl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NCTC13205_00128 (hsdR_1)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD AAA_22 PqqD
Other DBs
NCBI-ProteinID: VEJ24004
LinkDB
Position
1:141356..144403
AA seq 1015 aa
MKTYSTTEYATIQKPLIEFLKKMGYTYISPQEMQNMRVNASEVILKDILRTHLSKATFTH
KGENIPFSLEGIARALRELQSPSAEGLLKSNEKISNKLLYGIEVPQTLQDGSVKNQTLPL
IDFSNPYANDFSFTQEFEVLRVQKGERQRHRRPDIVVFINGIPIVVIELKKSSVSIEEGI
SQMIRNQKEEEIPQLFRFIQLTFVGSNQEAKYGTVGTQKKHYASWVEEDEKYLPPFFGEL
NANAIEKLMYSLLSKERLLEMISSFIVFEKSSKKVARHQQYFAIKQTLKRVQSHSGEVGE
KPREGGLIWHTQGSGKSLTMSLLATELKHSISGAKIIIVTDRKDLDTQIHKVFGNVGICV
SQAKSSTHLKELLGQGVSVITTLVHKFLSLKDKVIQEGRDIFVLVDEAHRTQGGELHACM
KKVFPNGCYIGFTGTPLLSKEKGSLQKFGGFIHKYTIKQALRDEAVLPLYYEGRMIEQFI
NNEAGLNKRFEILCRDLSDEQKSDLKAKFTQFRKIAPNLERLEWIAWDIYNHFKAYPFKA
MLATSSKYEAIKYHQIFQSKGWLRSAFVISAPDMREGYEEVESDNADEVRRAWEELMKKY
SNEEAYMQYIQDEFVHGDEIELLIVVDKLLTGFDAPNIGCLYIDKSLKEHNLLQAIARAN
RLFEDKECGLIIDYRGLLEDLSKALSEYEALSGYDAHDIAQAVISLKEHSLGIREKYQAL
EKFFSGAKSQEDYEVFLGDKEKREEFYSLLLEFSKSLKLLFLGEGYQEDFTSKEIETFKR
ALKFYIQLKSSVQIRYHQKVDFKAYEKQMQELLDRYVGANEAQVLVELVKIFDENFLSEG
EGITQNAQADRILSATSQVAIQEREKNPFFYDDLSQRINRILEDYRQNRIDEATKLLRAK
EIYQELKGYNNNTDQNYPKALNKIAQKAFYDNLKSKFNDEQKLIEFVLRLDEVFVQKSQK
PDWEHNSEVSKQIEQIIDDLLYEYEVDIASNRVEELIVQIREIGQKNYAGSQNSL
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgaaaacctactcaaccacagaatacgccaccattcaaaagcctcttatagagtttctt
aaaaaaatgggctatacctatatctctccccaagagatgcaaaatatgagagtaaatgca
agtgaagtgattcttaaagacattttacgcactcatctatctaaagccactttcacacac
aaaggagagaatatccccttctcccttgaaggcattgcaagagcattgcgagagttacaa
tcccctagcgctgaagggcttcttaaaagcaatgaaaagataagcaataagctcctttat
ggtattgaagtcccccaaactctgcaagatggaagtgtcaaaaatcaaaccctccccctc
attgatttttctaacccttatgccaatgattttagtttcacgcaagagtttgaagtgctt
agagtgcaaaagggggagaggcaaaggcatagacgccctgatattgtagtttttatcaat
ggtatccccatagtcgtcattgagcttaaaaaatcaagtgtaagcatagaagaggggatt
tctcagatgattcgcaaccaaaaagaagaggagattcctcagctttttagattcattcag
cttacttttgtaggaagcaaccaagaggctaaatatggcacagtaggcacacaaaagaag
cattatgcaagctgggtggaagaagatgagaaatatctgcccccattttttggtgaatta
aatgctaatgctatagaaaaactgatgtattcacttctcagtaaagagcgattattggag
atgattagctcttttatcgtgtttgaaaaatctagcaaaaaagttgcacgtcatcagcag
tattttgcaatcaagcaaacgcttaaaagagtgcaaagccacagtggagaggtgggagaa
aaaccaagagagggcgggttaatctggcatacacaaggcagtggaaagtctctgacaatg
agccttctagccacagagcttaagcactctatctctggagctaaaatcatcattgtcact
gatagaaaagatttggacactcagattcataaagtctttggcaatgtgggcatatgtgtc
tcccaagccaaaagctctacacatctaaaggagcttttaggtcaaggagtgagtgtgatc
acaactttagtgcataaattcctatcccttaaagataaagtaatccaagagggtagagat
atttttgtgcttgtggatgaggctcatcgcacacagggtggagagcttcatgcatgtatg
aaaaaggttttccctaatgggtgctatattggctttacaggcacacctttactctctaaa
gaaaaaggctcattgcagaagtttgggggatttatccataaatacaccattaagcaagcc
cttagggatgaggcggttttacctctgtattatgaggggagaatgattgagcagtttatc
aataatgaagcggggctaaataagagatttgaaattctgtgtagggatttaagtgatgag
caaaaatctgatcttaaggctaaatttacccaatttagaaaaatagctcccaatctagag
cgattggagtggattgcatgggatatttataatcacttcaaagcctatccctttaaagca
atgcttgccacaagctctaagtatgaagccatcaaatatcatcaaatctttcaaagcaag
ggttggctaagaagtgcttttgtcatctctgctcctgatatgagagaggggtatgaagag
gtagagagtgacaatgcagatgaagtgcgaagagcttgggaagagttgatgaaaaaatat
tcaaatgaagaagcttatatgcaatacattcaagatgagtttgtgcatggggatgagata
gagcttttaatcgttgtagataagctccttacggggtttgatgcacccaatattggctgt
ttgtatattgataagtctcttaaagagcataatctcctccaagccattgcacgagccaat
cgactttttgaagacaaggaatgtgggttaattattgattatcgagggttattggaggat
ttaagcaaggccttgagcgaatatgaggcactctcaggatatgacgcacacgatatcgct
caagcagtcatcagtcttaaagaacactctttgggcataagggagaaatatcaagcttta
gagaagtttttttctggagcaaaaagccaagaggattatgaggtctttttgggggataag
gaaaaacgcgaagagttttactctcttcttttggagttttcaaaaagtcttaaactcctt
ttcttaggagaaggatatcaagaggattttacttcaaaagagattgaaacttttaagagg
gcattgaaattttatatacagcttaaaagtagtgtgcagattcgctatcatcaaaaggtg
gattttaaagcttatgagaagcaaatgcaagagctccttgatcgctatgttggggcaaat
gaagctcaggtacttgttgaacttgtaaaaatatttgatgagaattttttaagtgagggc
gaagggataacacagaatgcacaagcagatagaatcttgagtgcgacaagtcaagttgct
atacaagagagggaaaaaaatccatttttctatgatgatttaagtcagcggattaatagg
attttagaggattatagacagaatagaatcgatgaggctacaaaacttttgagagccaaa
gaaatttatcaagagcttaagggttataacaataacacagaccaaaactatcccaaagcc
ttaaacaagattgctcaaaaagctttttatgataatctcaaatcaaagtttaatgatgag
caaaaacttatagaatttgtgcttagacttgatgaagtgtttgtgcaaaagtctcaaaaa
cccgattgggaacataatagtgaggtgagtaagcaaattgagcaaattattgatgattta
ctctatgaatatgaggtggatattgcctctaatagggtggaagagttgattgtgcaaatc
agagaaatagggcaaaaaaactatgcaggaagtcaaaatagtttataa

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