Helicobacter cholecystus: NCTC13205_00134
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Entry
NCTC13205_00134 CDS
T06600
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00300
Lysine biosynthesis
hcl00550
Peptidoglycan biosynthesis
hcl01100
Metabolic pathways
hcl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC13205_00134 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC13205_00134 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC13205_00134 (murF)
Enzymes [BR:
hcl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NCTC13205_00134 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
DUF4229
YhzD
PAP1
Motif
Other DBs
NCBI-ProteinID:
VEJ24010
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Position
1:149301..150758
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AA seq
485 aa
AA seq
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MIDAVLLNALDVLFLLSLGYYLITNLQWYNYSLYRVISKHHKWRWHILYFFAPIALFILF
NLLGYGGFFYLFCLFIYIPLLFFWAKKLDKPLKWTGRVFRFYGIYLLFILLDVVLQMAYG
KNIYSYFIALAFALLISNLFEYFLLNRYKKIASEKIASMPHCKIILITASYGKTSIKNYL
TQILKSRYMVHSTPRSVNTLVGIIADINTQLDYRSEFYIVEAGARQKGDIAQIAQFLNPQ
YVIIGKIGEQHLEYFKSLENIIETKFEALQSNRLRHALVESSNPIPQYALNRVQKAPTGI
RNIIATLNGTKFELEIDGEYREFQTPVLGTFNAYNIALAILMAKKVGMSLSEIVTKVKKL
NGVEHRLYKSEVNGRVILDDSFNGNLEGMLEAIRISSEHQGRKIIVTPGIVESTQEANTQ
LAHEISKVFDIAIITGELNCKTLSTAITRSKKILLKEKSMLENTLKATVKDGDLILFAND
APSYI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatagatgcagtattattaaatgctttagatgttttatttttattaagtttgggatac
tatctgattaccaatttgcaatggtataactatagcctttatcgtgtaatcagtaagcat
cataagtggcgatggcatattttgtatttctttgctcctattgcattatttatccttttt
aaccttttgggttatggaggatttttttatcttttctgcttatttatttatatcccactt
ctcttcttctgggcaaaaaagcttgataagcctttaaaatggacaggacgtgtttttcga
ttttatgggatttacctcctttttattttacttgatgttgtgcttcaaatggcatacggt
aagaatatttattcttattttattgcccttgcttttgctcttttaatttccaatcttttt
gagtattttcttcttaatcgctataaaaaaattgcaagtgaaaaaattgcttcaatgcca
cattgtaagattatattaatcactgcaagctatggtaaaacaagcattaagaactatctt
acacaaattcttaaatctcgttatatggtgcattctactccacgcagtgtcaatactctt
gtaggaattattgcagatattaacactcagcttgattatagaagtgagttttatatcgta
gaagcaggtgcaagacaaaaaggagatattgcacaaattgcacaattccttaatccccaa
tatgtcattattggtaagattggtgagcaacatttagagtattttaaaagtttggaaaac
attatagaaaccaagtttgaagccttgcaaagtaatcgcttaaggcatgctcttgtagaa
tcaagtaatcctattccacaatatgcactcaatagggtgcaaaaagctcctacaggcatc
agaaatatcatagccactttaaatggaacaaaatttgagcttgaaattgatggagagtat
agagaatttcaaactcccgtgctaggaacttttaatgcctacaatatagcattggcgatt
ttgatggcaaaaaaggttggaatgagtttaagcgagattgtcacaaaggtaaaaaaactt
aatggtgtagagcatcgtttatataaaagcgaagtcaatggtcgtgtgattttagatgat
agctttaatgggaatcttgaaggaatgctagaggcaattagaatttcctcagagcatcaa
ggcagaaaaattattgttacccctgggattgtagaaagcacacaggaagcaaatactcag
cttgcacatgaaatttccaaagtttttgatattgcaattattacaggtgaactgaattgc
aaaaccctttctactgctattacgaggagtaaaaaaattcttcttaaagaaaagagtatg
ttagaaaatacacttaaagccacagttaaagatggggatttaatcctttttgccaatgat
gccccaagctatatttag
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