Helicobacter cholecystus: NCTC13205_00163
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Entry
NCTC13205_00163 CDS
T06600
Name
(GenBank) putative cation antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcl02000
]
NCTC13205_00163
01504 Antimicrobial resistance genes [BR:
hcl01504
]
NCTC13205_00163
Transporters [BR:
hcl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NCTC13205_00163
Antimicrobial resistance genes [BR:
hcl01504
]
Gene variants
Tetracycline resistance genes
Transporters
NCTC13205_00163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
VEJ24036
LinkDB
All DBs
Position
1:182754..184277
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AA seq
507 aa
AA seq
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MNYSDTFFSLFVPLAVIVLVLLSKRIVLSLFVGIVLGGIMMHYQEPLHIFSYVYEKISSV
FYEYSPQEGLSANWGGIYVFLFLLSLGILSQVVLVCGGVAAFVEWARSRVKDTRTSEFVA
FFAGIVIFIDDYFNALTVGQIAKPLSAMHQSSRERLAYIIDSTSAPICVLVPISSWGAYI
IGILQSSLPKDQGNALFVLFGSIGGNFYAWFALIAVFLTILWQINLPVMRKNINVSIPQD
HQGEYPPSKISLLLLPIVALIFCILFMIFYTGYKTSGSFEILTMLANCDTPFSLFCGGMI
ALLFSLILSHQYIAPYQYTYIVYSGVKAMLPAIVILVLAWAIGPVIKEDLKTGLYLANLA
KENLSSQTLLLLPFSLFLVSAFISFSTGTSWGCFAIMIPIAIELSLQSGGNMIIAISAVL
SGAVYGDHTSPMSDTTILSSIGAGCSLQSHFITQLPYAGICAFFAGGSFLIFSLTQSILI
SFVICAMGLIGVFWLLKVKFGGELQGV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgaattattcagatactttttttagtttgtttgttcctttagccgtgattgttcttgtg
cttttaagtaaacgtattgtactttctctttttgtgggaattgtgttgggggggattatg
atgcactatcaagagccattgcatattttctcttatgtttatgaaaaaatttcatcagta
ttttatgagtattctcctcaagagggattaagtgcgaattgggggggaatttatgtattt
ttatttttgctctctttggggattctctctcaagttgtgcttgtttgtggaggagtagct
gcatttgtggaatgggcaagaagcagagtgaaggatacaagaacttcagaatttgttgca
ttttttgcaggaattgttatttttattgatgattattttaatgctcttacagttggacaa
attgccaaacctcttagcgcaatgcatcagtcaagcagagagagattggcatatattatt
gatagtacttctgcacctatttgtgtacttgttccaatttcaagttggggggcttatatt
attggaattttgcaaagttcattgccaaaagatcaggggaatgcactctttgtacttttt
ggaagtattggagggaatttttatgcatggtttgcactcattgcagtatttttaacaatt
ttatggcaaatcaatcttcctgtaatgagaaaaaatatcaatgtttctattccacaggat
catcaaggagaatacccaccttctaaaatctctctactgcttttgcctattgttgctctt
attttttgtattctattcatgattttttatacaggatataaaacttcaggctcatttgaa
attttaactatgcttgcaaattgtgatacacctttctctctgttttgtggaggaatgatc
gcattgcttttttctttaattctctcacatcaatatattgctccttatcagtatacatac
attgtttatagtggtgtgaaggccatgcttcctgcaattgtaattttagtgcttgcttgg
gcaattgggccagtgattaaagaagatttaaaaacagggctttatttagccaatcttgca
aaagaaaatctttcaagtcaaacactgttactcttgccattttccctctttttggtctct
gcatttatttcttttagcacagggacgagttgggggtgctttgcaattatgattcctatt
gctattgaattatctttgcaaagtggtggaaatatgattattgctatttctgcagtcctc
tcaggagcggtttatggagatcatacttcacctatgtcagatacaacaattcttagttca
attggtgcaggatgttctttacaaagccactttatcactcaacttccttatgctggaatt
tgtgcattttttgctggaggatcatttttgattttttctctaacacagagtatcttaatt
tcttttgtgatttgtgcaatgggattaataggtgtattttggctattaaaagtaaaattt
ggaggagagcttcaaggagtttag
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