Helicobacter cholecystus: NCTC13205_00278
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Entry
NCTC13205_00278 CDS
T06600
Symbol
rfaF
Name
(GenBank) ADP-heptose:LPS heptosyltransferase
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00540
Lipopolysaccharide biosynthesis
hcl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC13205_00278 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcl01005
]
NCTC13205_00278 (rfaF)
Enzymes [BR:
hcl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC13205_00278 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
hcl01005
]
Core region
NCTC13205_00278 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
VEJ24144
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All DBs
Position
1:complement(296427..297368)
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AA seq
313 aa
AA seq
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MATPTYYALKREFPKAHFTLIGSKASLGIFQREKATLILDESKKSKNRLFYLYKLGRNLG
KFDIAITLQNNFPSAWLLWATKSKIRIGYQANIRSFLLTHPLPAQKHLHQVLQYTHLLSA
LSLNVEHPHLQLIAHPQKRGKLIRIGISAGAKYGSAKRWCEAYFIEVIATLLQEGYEVLL
YGGEEEIQSNQRIQNALIHLVSIQNFHNLTAKTSITELIDSIASLDLFLTNDSGPMHIAS
ALCIPLIALFGPTDCTETSPFNTQSAQIIFNKHLSCSPCKKRECPLKHHQCMKLITPDEV
LSGIKNLLHEIKA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacccacttattatgctctcaaaagagaatttcccaaggctcatttcacgctc
attggttcaaaagcaagtcttggcatctttcaaagagagaaagccactttaatcctagat
gaaagcaaaaaaagtaagaatcgtcttttttatctctataaacttggaagaaacttggga
aaatttgatattgctataactttacaaaataattttccttcagcttggcttctttgggcg
acaaaatcaaaaatacgtatcggttatcaagcaaatataagaagctttttactcactcat
ccccttcctgcccaaaaacatcttcatcaagttcttcaatacacccatcttctctctgct
ctatcccttaatgtagagcatccccatcttcaacttatagcccatccacaaaaacgagga
aaactcatccgtattggtataagtgctggagcaaaatatgggagtgcaaaaagatggtgt
gaagcttattttattgaagtaattgcgactttattacaagaaggctatgaagttttactt
tatggaggagaagaggaaatacaaagcaatcaaagaattcaaaatgctcttatccacctt
gtatctatacagaattttcacaatcttactgcaaaaacaagtattacagagcttattgac
agcattgcatcacttgatttatttctcaccaatgacagtggccctatgcatattgcctca
gcactctgcattcctcttattgccctctttggtccaacagattgcacagaaacttctcct
tttaatacacaatctgctcaaattatttttaataaacatctctcttgttctccttgcaaa
aaaagagaatgtccccttaagcatcatcaatgcatgaaacttattactcctgatgaagtg
ctcagtggcattaaaaatttactgcatgaaattaaggcgtaa
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