Helicobacter cholecystus: NCTC13205_00353
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Entry
NCTC13205_00353 CDS
T06600
Symbol
rlpA
Name
(GenBank) rare lipoprotein A, RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcl01011
]
NCTC13205_00353 (rlpA)
Enzymes [BR:
hcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NCTC13205_00353 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hcl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NCTC13205_00353 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
IATP
Motif
Other DBs
NCBI-ProteinID:
VEJ24218
LinkDB
All DBs
Position
1:complement(361192..362127)
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AA seq
311 aa
AA seq
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MKKYYVLTFVSFLMIGCSSKSVYRGGSGGFEDYEDFSLFRKGTTFDPEYNAGYGGGESGA
LPSYNGGKGAGVDTRGMRESKAIQRATMRPYKIDGKWYYPQRVSLGEKFDGIASWYGPNF
HAKKTSNGEIYNMHAHTAASKILPMNTVVRVYNKENGKSTIVRINDRGPFVDGRIIDLSN
AAAHDISMVQKGTAQVQLEVIGFQGIIGTQMSRPSEMNQELKSEFKVGVSKESVDGGSFA
LQVGAFRRKEGAEETRQVFDQLKNYKTVIKEQELDDGVIYRVLIEGFRSEEEAQDFLSAH
PNIKAKVIIRQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatattatgttctaacttttgtttcgtttttgatgattggatgttcaagcaaa
agtgtttatcgtggaggaagtgggggatttgaagattatgaggatttctcactttttcgc
aaaggcacaacatttgatcctgaatataatgcaggatatggaggaggagaaagtggggca
ttgccaagttataatggaggtaagggggcaggtgttgatactcgtggaatgagggaatct
aaagccatccaaagagccacaatgcgtccttataagattgatggtaagtggtattatcct
caaagggtgagtttgggggaaaagtttgatggaattgcaagctggtatggaccaaatttt
catgctaaaaaaacttctaatggtgagatttataatatgcatgcccatactgctgcaagc
aagattttgcctatgaatacagttgtgcgtgtgtataacaaagaaaatggaaagagtaca
attgtgcgaattaatgataggggaccttttgttgatgggagaattattgatctctcaaat
gccgcagcacatgatattagcatggttcaaaaaggaactgcacaagtccaactagaggtc
attggttttcagggtattattggaacacaaatgagtcgcccaagtgagatgaatcaagaa
cttaaatctgaatttaaagttggtgtgagtaaagagagtgtagatggtggaagttttgcc
cttcaagtgggtgcatttagacgcaaagaaggtgctgaggagacaaggcaagtttttgat
caacttaaaaactataaaactgttatcaaagaacaagagcttgatgatggtgtaatttat
cgtgtgcttattgaaggatttaggagtgaagaagaagcccaagactttctttctgctcat
ccaaatattaaagcaaaagtaattattcgacaatga
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