KEGG   Helicobacter cholecystus: NCTC13205_00371
Entry
NCTC13205_00371   CDS       T06600                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hcl  Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:hcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hcl03016]
    NCTC13205_00371 (truD)
Enzymes [BR:hcl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     NCTC13205_00371 (truD)
Transfer RNA biogenesis [BR:hcl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NCTC13205_00371 (truD)
 Prokaryotic type
    NCTC13205_00371 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: VEJ24236
LinkDB
Position
1:377496..378590
AA seq 364 aa
MKIYPYSHSPIDFLFTQTPRDFVVQEIPLYPSSGEGEHLIIEVRKKSLSTPELLKILSST
LCIQSREIGYAGLKDKNALTTQYLTIPKSAQNKLKYLDTQNIKILSTSLHSNKLRIGHLK
GNKFFIRLKKVQKKDLQKISQVLENIKKYGIPNYFGFQRFGKFGDNYLEGKTLVEKKKKI
RNKKLALFLISSYQSHLFNLWLSQRIKLSKLLCDFKGKELEIALKLQSLPPLNTIPKPQE
HPFKILEGDLMHHYPHGKLFFTQDLDSEAQRFVQKNIVPCGILSGKKITLPLSDALTYQE
AFLDPAIYEIGSHRFCWVFPEDLEYRYIEEKAHLELNFYLPKGSYATILLETLANREIKG
ENSV
NT seq 1095 nt   +upstreamnt  +downstreamnt
gtgaaaatttatccctattcccactctcctattgattttttatttacacaaaccccaaga
gactttgttgtacaagaaattcctctttatccaagtagtggagagggggaacatttgatc
attgaagtgagaaaaaaatcactctccactcccgaacttctgaagattttaagttcaacc
ctatgtattcagagtagagaaattggttatgcaggattaaaagataaaaatgccctcacc
actcaatatcttacaattccaaaatctgcacaaaataagcttaaatatcttgatacacaa
aatattaagattctttccacatctttacatagtaataagctacgtattgggcatcttaag
ggaaataaattctttattcgtctaaaaaaagtacaaaaaaaagatttgcaaaaaatctct
caagtcttagagaatattaaaaaatatggaatacctaattattttggttttcaaagattt
ggaaaatttggagacaactatcttgaaggcaagactttggtagaaaaaaagaaaaaaata
cgcaataaaaaacttgcactcttcttaatatcaagctaccaaagtcatctttttaatctt
tggttatctcagagaattaaacttagcaaacttctttgtgattttaaaggaaaagagcta
gaaatagcattaaaacttcaatctcttcctccacttaatacaatacccaaacctcaagaa
cacccatttaagattcttgaaggagatttaatgcatcattatcctcatggaaaactcttt
tttacacaagatcttgacagtgaagcgcagagatttgtacaaaaaaatattgttccttgt
gggattctctcgggtaaaaaaatcactcttcctttaagtgatgcactgacttatcaagag
gcctttttggatcctgcaatttatgaaattggctctcatcgattctgctgggtctttcct
gaagatttagaatatcgctatattgaagaaaaagctcatctagaattaaacttttatctt
cctaaaggctcttatgccacaatcttactagaaactctagctaatagagaaattaaagga
gaaaacagtgtataa

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