Helicobacter cholecystus: NCTC13205_00392
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Entry
NCTC13205_00392 CDS
T06600
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00470
D-Amino acid metabolism
hcl01100
Metabolic pathways
hcl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC13205_00392 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC13205_00392 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcl01011
]
NCTC13205_00392 (alr)
Enzymes [BR:
hcl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NCTC13205_00392 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
hcl01011
]
Precursor biosynthesis
Racemase
NCTC13205_00392 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
YHYH
GSKIP_dom
Motif
Other DBs
NCBI-ProteinID:
VEJ24257
LinkDB
All DBs
Position
1:396929..397951
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AA seq
340 aa
AA seq
DB search
MAEVLINSQYFKHNLNLISKHLFNRQTLALVLKDNAYGHGLREIASLARENGIESVFVKN
EFEALQIKNDFKHITAFYGSISHDSPNNIYQSVQTLTTLKNLSTNRGFELEINCGMNRNG
IHPTQLKDAFAIIAKRNLKLIGVFSHNGFSDEGGECMKMQEDTSLEVQRQVLDLCSFYSL
PTPRFHFHNSSGTFRKKNIQELVRIGIAGYGYLCANHPLCAELKPIASLWADKICSHQLK
KGERIGYGGVWQMPNDGVVSSYDLGYGDGLFRISEYTKKKLYCAEGEQILPRMSMDCFST
ISQKERICLFRDVREWAEIFETIPYEILTKLSPFIKRRIV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagttttaattaactctcaatactttaaacataatctcaatcttatttccaaa
catctcttcaatcgacaaactctagctctagttcttaaagataatgcttatggtcatggc
cttagagaaatagcaagcttagcgagagagaatgggattgagagtgtgtttgttaaaaat
gaatttgaagctctgcaaattaaaaatgactttaaacatatcacagccttttatggctct
atctctcatgattctccaaacaatatttaccaaagtgttcaaacacttactacactcaaa
aatctctctacaaatcgtgggtttgagcttgaaataaattgtggaatgaatcgcaatgga
attcaccctacgcaactcaaagatgcatttgcaatcattgcaaaaagaaatttgaaactt
attggagttttctctcataatggtttcagtgatgaggggggagaatgtatgaagatgcaa
gaagatacaagtcttgaagttcaaagacaagtcctagatctatgttcattttattcttta
ccaacgccaagatttcattttcataattcttcaggtacttttagaaaaaaaaatattcaa
gagcttgtgcgtattgggattgctggttatggatatctttgtgctaatcatccactatgc
gcggagcttaagcctattgcaagtctttgggcagataaaatttgctctcatcagcttaaa
aaaggagaaagaataggatatggcggtgtttggcaaatgccaaatgatggagttgtaagt
agctatgatctcggttatggtgatggactttttagaattagcgaatatacaaaaaagaag
ctatattgtgccgagggagagcaaattcttcctagaatgtctatggattgtttttcaact
attagccaaaaggagcgtatttgtctttttagggatgtgagagagtgggcagagattttt
gaaactatcccttatgaaattctcacaaaactttcaccctttatcaaacgaaggattgtt
taa
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