KEGG   Helicobacter cholecystus: NCTC13205_00447
Entry
NCTC13205_00447   CDS       T06600                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
hcl  Helicobacter cholecystus
Pathway
hcl00260  Glycine, serine and threonine metabolism
hcl00460  Cyanoamino acid metabolism
hcl00630  Glyoxylate and dicarboxylate metabolism
hcl00670  One carbon pool by folate
hcl00680  Methane metabolism
hcl01100  Metabolic pathways
hcl01110  Biosynthesis of secondary metabolites
hcl01120  Microbial metabolism in diverse environments
hcl01200  Carbon metabolism
hcl01230  Biosynthesis of amino acids
hcl01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:hcl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    NCTC13205_00447 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    NCTC13205_00447 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NCTC13205_00447 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    NCTC13205_00447 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    NCTC13205_00447 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    NCTC13205_00447 (glyA)
Enzymes [BR:hcl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     NCTC13205_00447 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Aminotran_5
Other DBs
NCBI-ProteinID: VEJ24311
LinkDB
Position
1:457014..458264
AA seq 416 aa
MSFYLQEQDKEIFNLIEKEFERQNTHLELIASENFTFPSVMEAMGSILTNKYAEGYPYKR
YYGGCEFVDEIETIAIERAKKLFNCSFANVQPHSGSQANGAVFNALLKPYDKILGMDLSH
GGHLTHGAKVNASGKIYQSFGYGVDLDGCINYEKVREMAHYIKPQLMICGFSAYTKELDF
KKFKEIAQEVGAILMADIAHIAGLVVADEYPNPFPYCDVVTTTTHKTLRGPRGGAILTND
EEISSKINKAIFPGIQGGPLMHVIAAKAVGFLENLKPEWKTYAKQIKLNINIMADMLMQR
GYKLVGNGTQNHLILMDFLQKNFSGKDADLALGNAGITVNKNTVPGETRSPFVTSGIRLG
SPALTARGMKEEDFKFVANKIADVLDDINNPKIQEKVWEEVRAFSQKFKLYHQPIY
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgagcttttatctacaggaacaagataaagagatttttaatcttattgaaaaagaattt
gagcgacaaaatacacatttagagcttattgcaagtgagaatttcactttcccaagtgtc
atggaagcaatggggagtattttaactaataaatatgcagagggttatccttataagcga
tattatggtgggtgtgaatttgttgatgaaattgaaactattgctattgagagagcaaag
aaactttttaattgttcttttgctaatgttcaacctcattctgggagtcaagctaatggt
gcagtttttaatgcactccttaaaccttatgacaaaattttaggaatggatttaagtcat
ggagggcatcttactcatggtgcaaaagttaatgcaagtggaaaaatctatcaaagcttt
ggttatggtgtagatcttgatggctgtattaattatgaaaaagtaagagaaatggcacat
tatattaagcctcaacttatgatttgtggttttagtgcctataccaaagaattagatttt
aaaaagtttaaagaaattgcccaagaagttggagcaattcttatggcagatatagcccat
attgcaggacttgttgttgcagatgagtaccccaatcctttcccatattgcgatgtcgtt
acaacaacaacacataaaactttaagaggtccaagagggggtgcaattttaaccaatgat
gaagaaatttcaagtaaaattaataaagcaattttccctgggattcagggtggtccatta
atgcatgtcattgctgcaaaggctgtaggattcttagaaaatcttaaacctgaatggaaa
acttatgctaagcaaatcaagcttaatattaatataatggcagatatgcttatgcaaaga
ggctataaacttgtaggaaatggtacacaaaaccatttaatcctaatggatttcttacaa
aaaaactttagtggaaaagatgctgatcttgcattaggaaatgcaggaatcacagtgaac
aaaaataccgttcctggagaaactagaagtccatttgttaccagtggaattcgacttggc
tctcctgcacttactgctagaggaatgaaagaagaggattttaaatttgtagccaataaa
attgccgatgtgcttgatgacatcaacaacccaaagattcaagaaaaagtttgggaagaa
gtgagagcatttagccaaaaatttaaactttatcatcaacctatctactaa

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