Helicobacter cholecystus: NCTC13205_00456
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Entry
NCTC13205_00456 CDS
T06600
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl03030
DNA replication
hcl03430
Mismatch repair
hcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13205_00456 (dnaQ)
03430 Mismatch repair
NCTC13205_00456 (dnaQ)
03440 Homologous recombination
NCTC13205_00456 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcl03032
]
NCTC13205_00456 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hcl03400
]
NCTC13205_00456 (dnaQ)
Enzymes [BR:
hcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13205_00456 (dnaQ)
DNA replication proteins [BR:
hcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13205_00456 (dnaQ)
DNA repair and recombination proteins [BR:
hcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13205_00456 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF4504
Motif
Other DBs
NCBI-ProteinID:
VEJ24320
LinkDB
All DBs
Position
1:complement(464291..465139)
Genome browser
AA seq
282 aa
AA seq
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MKHIIRFDPSLKGNLPPKPLKLRPKSNVILQALENKSIPLHEFISLCSEDEVLRNLAICD
HSLEFLHTIGLDISLINQEVFLGSLKRSLKDQIFCFVDIESSGADPRISQILEIGAIKYC
NGKVLDRFESYVRASNVPEIIQEITGITPEALCDAPQEKEVLQSFRKFLGDSIFVAHNVG
FDYTFLDYCYCRFFGVGLYNQKLCTIELAKRSIVAPRYGLNFLNNFLEIHTPQVHRAYAD
AYTCMRIFEKSLKNVDACFFSAQSLLNFSQKAKSLKNLDENS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcatattattagatttgatccctctttaaagggaaatcttcctccaaaaccccta
aagcttcgaccaaagagtaatgtgattttgcaagctttggagaataagagcattcctttg
catgagtttatttctctttgttctgaagatgaagtgctaagaaatttagcaatttgtgat
cattcactagaatttttgcacaccattggtttggatattagcttaatcaatcaagaagtt
tttcttggatctttaaaaagaagcttaaaagatcaaattttttgttttgtagatattgaa
agcagtggtgctgatcctagaatttctcaaattcttgaaattggtgcaattaagtattgc
aatggaaaagtattggatcgttttgaaagttatgtaagggcaagtaatgtgccagagatt
attcaagaaattacaggaatcacgccagaagccttatgtgatgctccacaagagaaggag
gttctacaaagttttagaaagttcttgggtgatagtatttttgtagcacataatgtaggc
tttgattatacttttttagattattgttactgtagattctttggtgttggattgtataac
caaaaattatgcaccattgagcttgctaaaagaagtattgtagcacctcggtatggattg
aattttttgaataattttttagaaattcatacccctcaagttcatcgtgcttatgcagat
gcttatacttgtatgagaatttttgaaaaatctcttaaaaatgtggatgcgtgttttttt
agcgcccaaagccttttgaatttttctcaaaaagcaaaaagtcttaaaaatttagatgaa
aattcttag
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