Helicobacter cholecystus: NCTC13205_00539
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Entry
NCTC13205_00539 CDS
T06600
Symbol
fhaB_2
Name
(GenBank) haemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hcl00536
]
NCTC13205_00539 (fhaB_2)
Glycosaminoglycan binding proteins [BR:
hcl00536
]
Heparan sulfate / Heparin
Microbial pathogens
NCTC13205_00539 (fhaB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
VEJ24402
LinkDB
All DBs
Position
1:570321..577127
Genome browser
AA seq
2268 aa
AA seq
DB search
MKKLSFLLQCCLSSLLSLSLIFLPLCANSVSSLNSPISNHPLPLNNSTPSSPPIIIDPSS
LNTSLDISANGVDILNIASPDSKGISNNLFLEFNVKENGLIFNNSTLALTPSLLGEMITA
NPNLINPASFILNQVTSTSASTLLGFMEIAGSSASLLIANPNGITCQGCGFINANDITLS
TALPQIMDNGHIELNIQKGIININSLNALGSASLSLLAKSLSFNAELYANTLRAILGSNM
ITLDQKGSLLLWQPIQREDHSTSLALDVGYLGRVYASSIFMVASDEGVEAKIKGVMATYP
TQREGDGGFYIDINGDLKISKREGENWAEENNSFSQENFSSNSLPNKQDNTHKVIQESLN
INQGRFKENKGLDGKERLAHKEQGGENFPSLFSSSTMHIHSKTLNNEGYILSLEDASIQA
QSLHNISILSSNQTLNLRAKEIGNTHGLIKGNNLVVQSEKIINSEGFILAKENAFIQANE
ILNRAKIKLAEQKVSQEHITIGRWKDYDYYKGPSFISSSQYLNEGDKDYIQTIYEDKIQS
YSPAMFYAGNTLVIQAQNLENFDGQIGGEKESNLDVLVLNNHATQALRKVIKSGREAKHY
TKRVKCGFFDFFTCGHKNVTAFGVFAYNPAAQITQINLSLPLFADSLSLSPNTQDIVVFN
SYNPQNIKAKEVTEENLKDFILSDYFKQRLLSLSFETQKEFLTSLSPQERYAFISSLSKN
DQNYLLKNFNNIHLDSFSSTLSLQNLPILLALNQRLNQELQNKYTIQNQQNKNFLLSLPS
ILNMASTSLSGNIAGESIYIQAKVLNNEGSIIASGGVFAQTKEKILNSGGIEAENITLNS
KGEISNLGGRIKAEENLALNADSMKMSSSIYTQESYKEYAFSKISLLGGDETPTSSLPLS
KSAKHLKVLSTQSQTLLSESFLSGKNITLGAKDTLSLSATKLNATNNLILNAKDITLSTQ
TLEQKDFRDEAALSSSNTLLTNSLNAKNIILNASNSLTSSSSSLQATSLLALDAKNISLL
ADKQENYSHSNRSDGRRKSSTTTSNSLSIINTLVGENILINASESVFSVGSSLRAKENLL
LNAKDFTSLSALSSHSTSSSSSHKELFSSKGSSSSLAQESNTLAEFEAKNISLSTSEDML
LLGATLKAQEGVNITAGSFTLSSVNDQSTTSSSSSKDILWGAIKKEKGEKVSKESALSSS
ITASNLSIQTNNEDLNLIGSDLNISDSASSLNILNAFNTTTTSSSSYSRTLSGGFVDLKR
KLRAGLKFKEKENSTQISQREVVASHFNVGSISLSAKDALNIKAANIQAEGEIQALASSI
TISSEQEVREGRERDREGELKVGVEIGNAYVDAYYAGKDFYQAQKRLYKAIQALKKAKQD
YKEGKISKEALEDYKTNLALLSSSLLTNTTNLTSSFSSIASSLTSSYGSGFYAGGFTEYE
GNISNSTFKDITQVSSSLSASSISFTSTSSYTLLSSSLLAQDIEINSGGEVKIEALANER
TSNFQSTEYGVSLSFGTAGVNGSNMMGGERRERAKSVSYVASSLSASSLSINSGEKLTLS
SSSAIARDMSIQAKELEVVSKSDTDLRVSKSFNGNGGVNGDSGSIGGGFGRGREEVSWLN
TPSSLLASSSLSITLEDTLTLKGGVIGLGEEEESNQRKTERQGTQEIKQIQEIENKKSPT
LFISAKSIKATHIKNTSKQESNGLNLSTSIGRSSNSLGIALSGNTELSLLEERKGREGVS
YASIGSLNPKAEIHISLSDQSSLKDPSPTLTQFSTLKSLEDKENVYNFLPPSPNSSLTSS
PQSNQGIESLQDQPSFSKDTILPNAQSKKDLQTQTSLQTLKNLGVNSNLEKSEYTEEERV
ERALNASLSMDNDLLSSIGRERIRDNFVNLGRNLAQIGRGLTNNILTQSVVNTLRDKQSN
LIKEMYRYALIDEALSTLFAQEELINSLNGLTNLTSEQVQEVLNEVAQSASGEDGLNAPL
RLYNNEEYTKGYAYSQSKEESKRGSKGASKSGSKRGDKREEWIGFNTLSNDLSKPHEVIN
TLFHETSNQALHRSNEEYANNRGNSAESIFSLKNYANSNTNLTTSRQWNERENHRERLRG
GGVLREGNSYNARAYLGEWEGRGERENAEIRRRALSFDKEGKWEKGIDKLHHEHIFFEDE
EGGNVGFATDWEMVTDATYYPYDPVDGAYYKTKAIGKFFTETDPSVIARYRATDGKHYDD
AIMRQAVEDVKKYGMFKYYYLTINNCQDFIKQVKIRYQKIFKQQRGGK
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctttccttcttattgcaatgttgtttatcttctctcctttctttatctctt
atctttcttccactctgtgctaactctgtatcttctttgaattctccaatctcaaatcat
cccctgcctttgaataattctacaccctcctctcctccaatcatcattgacccttcttct
ttaaatacaagccttgatatttctgctaatggggtggatattctcaatattgcatctcct
gatagcaaagggatctctaataatctcttcttagaatttaatgtcaaagaaaatggctta
atctttaataattcaactctagcccttactcctagtctattaggagagatgattactgct
aatccaaatctcatcaatcctgcttcttttattcttaatcaagtcacttctacttctgct
tctactctactgggttttatggagattgcaggaagttctgcttcacttttaattgcaaat
ccaaatggaattacttgtcagggttgtggctttattaatgccaatgatattactctctcc
actgcattgcctcaaataatggataatgggcatatagagttaaatattcaaaaaggcata
atcaatattaactctcttaatgctctaggatctgcttctctttcccttttggcaaaaagt
ctctcttttaatgcagaactttatgccaatacactaagagcaatcctaggctctaatatg
attactttggatcaaaaaggttctcttctactctggcaacctatccaaagagaagatcac
tctacctcccttgctcttgatgtaggctatctgggaagagtgtatgctagttctatcttt
atggttgcatccgatgagggagtggaagcaaagattaaaggagtaatggctacatatcct
actcaaagagaaggggatgggggcttttatattgatattaatggggatttaaagatttct
aagagagagggagagaattgggcagaagagaataactctttctctcaagagaatttctct
tcaaattctcttcccaacaaacaagataatactcataaagtcatccaagaaagtctgaac
atcaatcaaggaagatttaaagaaaataagggattagatggaaaagaaagattagcgcac
aaagagcaagggggagagaatttcccttctctcttttcttcttcaacaatgcatattcat
tcaaagaccttgaacaatgagggctatattctctctttagaggatgcttctatccaagct
caaagtttacacaatatctctattctctcctcaaaccaaacccttaatcttagggccaaa
gagattgggaatacccatgggttgattaaaggcaataatctagtagtccaatcagagaaa
atcattaattctgaaggttttattcttgcaaaagaaaatgcctttattcaagccaatgag
atccttaatagagcaaagattaaattagcagagcagaaagtttctcaagaacatatcaca
ataggaagatggaaagattatgattattataagggaccttcttttatttcttcatctcaa
tatcttaatgaaggggataaggactatattcaaaccatttatgaggacaaaattcaaagc
tatagccctgcaatgttttatgcaggaaatacacttgtaatccaagcacaaaatcttgag
aactttgatggacaaattgggggagagaaagagagcaatcttgatgtcttagtgcttaat
aaccatgcaacacaagctttaagaaaagtgataaaaagtgggagggaggctaagcattac
actaagagggtgaaatgtggtttctttgatttttttacttgtgggcataagaatgtgact
gcctttggtgtatttgcctataatcctgctgcacaaattacacaaatcaatctttctctt
cccttatttgcagatagcctctccctctctcctaacacacaagatattgttgtttttaac
tcctataatccccaaaatatcaaagcaaaagaagtcacagaagagaatcttaaagatttt
atcttgagtgattattttaagcagagactcctctctctttcctttgaaactcaaaaagag
tttttaacctctctaagccctcaggagagatatgcttttatatcctctctgagcaaaaat
gatcagaattatcttttaaaaaatttcaacaatatccacctagattccttttcttccact
ctctccctccaaaatctccctattcttttagctctcaaccaaagacttaatcaagagctt
caaaacaaatacactattcaaaatcaacaaaataaaaattttcttctttctctcccctca
atccttaatatggcttcaacatctttgagtggaaatattgcaggagagagtatctatatc
caagcaaaagttcttaataatgagggaagcatcattgcaagtgggggagtttttgcacag
actaaagagaaaatactgaattctggaggtatagaagcagagaatatcactttaaactca
aagggagagattagtaatcttggagggaggattaaggcagaagaaaatctagctttaaat
gcagattcaatgaaaatgtcttctagcatttatacacaagaaagctataaagagtatgcc
ttctctaaaatatctctcttaggaggagatgagactccaacctcttctcttcccctctct
aagagtgcaaaacatctaaaagtccttagcactcaatctcaaacccttctctctgaaagc
tttttaagtggtaaaaatatcactctgggtgctaaagacaccctctccctctctgcaaca
aagcttaatgcaacaaataacctgattttaaatgcaaaagacatcaccctctccactcaa
accttagagcaaaaagactttagagatgaagcagccctaagctcttcaaatacccttctt
acaaattctttgaatgccaaaaatatcatacttaatgcctctaattctcttacttcctcc
tcttcttctcttcaggctacttcccttcttgctcttgatgcaaaaaatatttccctttta
gccgacaaacaagagaactattcacactctaataggtcagatgggagaagaaaaagctct
acaaccacatctaattctttatccattatcaacacacttgtaggggaaaatattttaatc
aatgcttctgaaagtgttttttcagtaggaagctcattgagagcaaaagaaaatcttctc
ttaaatgccaaagactttacttctctctctgctctctctagccattctacatctagctca
tcttctcacaaagagttattcagttctaagggttcttcaagctctcttgctcaagagagt
aataccctcgcagagtttgaagcaaagaatatttctctctccacttctgaagatatgctc
ttgctgggtgcaactcttaaagctcaagaaggagtgaatatcactgcaggctcttttacc
cttagctctgtgaatgatcagagcaccacctcttcctcttcttctaaagatatcctttgg
ggagcgattaagaaagaaaagggtgagaaagtgagtaaagaaagtgcactctcttcttct
atcactgcttcaaatctctccattcagacaaataatgaggatttaaatcttataggaagt
gatcttaatattagcgactctgcctcctctcttaatatcctcaatgcctttaacacaacc
accacttcctcttcctcttattcaagaactctcagtggaggatttgttgatcttaaaaga
aagcttagagcaggattgaagtttaaagaaaaagaaaatagcacccaaatcagtcaaaga
gaggtggtagcctctcactttaatgtaggctctatatctttgagtgcaaaagatgctctt
aatataaaggctgcaaatattcaagcagagggtgaaattcaagcattggcttcctctata
accatttcttcagagcaagaagtgagagagggaagggagagagatagagagggagagtta
aaagtaggagtagaaataggcaatgcttatgtggatgcttattatgctgggaaagatttc
tatcaagcacaaaagaggctttataaggcaatacaggctttaaaaaaagcaaaacaagac
tataaggaaggaaagatcagcaaagaagctctagaggattataaaacaaaccttgccctc
ctctcttcctctcttcttacaaacacaaccaacttgacttcctcattttcctccattgct
tcaagtctaactagctcttatggaagtggcttttatgcaggaggatttacagaatatgag
ggcaatatctcaaactctactttcaaagacatcactcaagtttcttcctctctctccgcc
tcttctatctcttttacctccacttcttcctataccctcctctcctcctctcttcttgct
caagatatagagattaactcagggggagaagtcaaaattgaagctttagccaatgaaaga
acttcaaactttcaaagtacagagtatggagtatctctgagctttggcacagcaggagtg
aatgggagcaatatgatgggaggagaaaggagggagagagcaaagagtgtaagctatgtg
gcctcttccctctctgcttcttccctctctatcaattcaggagagaaactcactctctcc
tcttcctctgctattgctagggatatgagtatacaggccaaagagttagaggtagtttct
aagagtgatactgatttaagagtttctaagagttttaatggtaatggtggagtaaatgga
gatagtggaagtataggaggaggatttgggagagggagagaggaagtctcttggcttaat
actccctcctctcttctagcctctagctctcttagtattactctagaggatactcttact
ctaaagggaggagttataggattaggggaagaggaggagagcaatcagagaaagacagag
agacaaggcactcaagaaataaaacaaattcaagagatagagaataagaaatcccctact
cttttcatctctgctaagagtattaaagcaacgcatattaagaatacaagtaagcaagaa
agcaatggattaaatctctctacttctatagggagaagctctaattctctaggaattgct
ctaagtggcaatactgagctttctttactggaagagagaaaggggagagagggagtaagc
tatgcaagtataggaagcttaaatcctaaggcagagatacatatttctttaagtgatcaa
tcctctcttaaagatccctcccctactcttactcaattctctactttaaagagtttagaa
gataaagagaatgtatacaatttccttcccccttctcctaattcttctctcacttcctct
ccacagagtaatcaaggaatagagagcttacaagatcaaccctctttttccaaagataca
attctccctaatgcacagagtaagaaagacttacaaactcaaacatctcttcaaactctc
aagaatctaggagttaatagcaatttagagaagagtgaatatacagaagaagagagagta
gagagagccttaaatgcaagtttgagtatggataatgatctcttaagctctataggaaga
gagagaataagagataactttgttaatctaggaagaaatctagcccaaataggcagagga
cttacaaacaatattcttactcaaagtgtagtgaatactttaagagataagcaaagcaac
cttattaaagagatgtatcgctatgctttaatagatgaagctcttagcactctctttgct
caagaagagctgattaattctcttaatggattaaccaatctcacttcagaacaagtccaa
gaagtcttaaatgaagttgctcagagtgcaagtggagaggatggattgaatgctcctctt
agactttataataatgaagagtatacaaagggatatgcttatagccaaagtaaagaagag
agtaagaggggaagtaaaggagcaagtaagagtggaagtaagagaggggataagagagaa
gagtggatagggtttaatactctaagtaatgatttaagtaaacctcacgaagtgattaat
actctctttcatgaaacaagtaatcaagcactgcatagaagtaatgaagagtatgcaaat
aatagaggcaatagtgcagagagtatcttctctcttaagaattatgccaatagcaatact
aacttaacaacttcaaggcagtggaatgaaagagagaatcatagagagaggcttagagga
ggtggagtattaagagaggggaatagttataatgctagggcatatttaggagagtgggaa
gggagaggggagagggagaatgctgagataaggaggagagcgttaagttttgataaagaa
ggaaaatgggaaaaaggaatagacaagcttcatcacgaacatatcttctttgaagatgaa
gaaggtgggaatgtggggtttgcaactgattgggaaatggtaacggatgcaacatattat
ccatacgatccagtagatggggcatattataaaacaaaagccataggcaagtttttcaca
gaaacagatcctagtgtgattgctagatatagggctacagatggcaaacactatgatgat
gcaattatgagacaagcagtagaagatgtgaaaaaatatgggatgtttaagtattactat
cttacgataaataactgccaagactttattaagcaagttaagattagatatcaaaaaatc
ttcaaacaacaaaggggtggaaagtga
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integrated database retrieval system
