Helicobacter cholecystus: NCTC13205_00588
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Entry
NCTC13205_00588 CDS
T06600
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00051
Fructose and mannose metabolism
hcl00541
Biosynthesis of various nucleotide sugars
hcl01100
Metabolic pathways
hcl01250
Biosynthesis of nucleotide sugars
Module
hcl_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
NCTC13205_00588 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC13205_00588 (gmd)
Enzymes [BR:
hcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
NCTC13205_00588 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Glyco_trans_4_2
Motif
Other DBs
NCBI-ProteinID:
VEJ24451
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Position
1:complement(620852..621964)
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AA seq
370 aa
AA seq
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MKKALITGITGQDGAYLAEFLLDKGYEVHGIKRRTSLFNTDRIDHLYQDPHESNIRFILH
HGDLTDSTNLIRIIQEVQPDEIYNLAAMSHVAVSFEEPEYVANADGIGTLRILEAVRILG
LGKKTKIYQASTSELYGLVQEVPQNEKTPFYPRSPYACAKLYSYWITVNYREAYNFFACN
GILFNHESPIRGETFVTRKIIRAVSKIALGLQDKLYLGNLSAKRDWGHAKDYVEAMWLIL
QQDKPQDFCIATGISTEVREFVRMAFSYIGISIEFKGKGVEERGYIASCAHPEYQLEVGR
EVVSVSSKYFRPTEVDFLLGNPQKAKRELGWEPKYTLQDIIEDMMSSDLALIKKDRYLQE
GGHKIMRHFE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcattaatcacagggattacaggacaagatggtgcatatttagcagagttt
ttattggataagggctatgaggtgcatggaattaagcgtagaacctcattatttaataca
gatcgcatcgatcatctctaccaagatcctcatgaaagcaatattagatttatcctccac
catggagatctcacagatagtacaaaccttattcgcatcattcaagaagttcaacctgat
gaaatttacaatcttgcagcaatgagtcatgtagctgtaagctttgaagaaccagagtat
gtggcaaatgcagatgggattggtacgcttaggattttagaggcagtaagaatcctagga
cttgggaagaaaacaaaaatttatcaagcttctacaagtgagctctatggacttgttcaa
gaagtgcctcaaaatgaaaaaacccctttttatcctcgctctccttatgcttgcgcaaag
ttatattcttattggattacggtcaattatcgagaagcttataacttttttgcttgtaat
ggaattttatttaatcacgaaagccctattcgtggagagacatttgtaactcgaaagatt
ataagggctgtgagtaaaattgccttagggcttcaagataagctctatttaggaaatctt
tcagctaaacgtgattggggacatgcaaaagattatgtagaggcaatgtggttgatttta
caacaagataagcctcaagatttttgtattgctacaggcattagcacagaggtaagagaa
tttgtgagaatggcatttagctatattggcataagcattgagtttaaaggaaagggggta
gaggagaggggatatattgcttcttgtgctcatccagaatatcagcttgaagttgggcga
gaggttgtaagtgtatcttccaaatacttccgcccaacagaagtggattttttgttggga
aatccccaaaaagctaagagagagctaggatgggagccaaaatatactcttcaagatatt
atagaagatatgatgagctctgatcttgcattgataaaaaaagatcgctacttacaagag
ggtgggcataagattatgagacattttgaataa
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