Helicobacter cholecystus: NCTC13205_00873
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Entry
NCTC13205_00873 CDS
T06600
Symbol
rarA
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
NCTC13205_00873 (rarA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
RuvB_N
AAA
AAA_assoc_2
AAA_5
AAA_14
nSTAND3
AAA_22
AAA_3
AAA_28
AAA_18
AAA_16
Rad17
RNA_helicase
Sigma54_activ_2
ORC-CDC6-like
AAA_2
ATPase_2
ABC_tran
Sigma54_activat
AAA_17
bpMoxR
Mg_chelatase
NPHP3_N
AAA_33
SKI
NACHT
Zeta_toxin
DUF5906
AAA_7
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
VEJ24718
LinkDB
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Position
1:917496..918671
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AA seq
391 aa
AA seq
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MRNLSNLLRPNKLENFVGQSHIIGKETPLYNALSARVLPHCIFFGPPGCGKTTLARILAQ
SIGSEFYEFNATHFKLEDLRKIIAPNSLLKPAIFIDEVHRLSKTQQEALLPIMEENQAYI
FASSTLNPIFSLTNAIRSRSFIFEFLPLRKEEMQKLIDKALELLKIDITHEAREYLISSS
GGDARAMLNLLDLASLSAPITLKTLKSLRPTPMKEGVSEEDTHYNLSSALIKSIRGSDEN
AGIYYLARIIESGESAEFIARRLVILASEDIGNANPNALNLAVSTLQAVRKIGYPEARII
LAQCVIYLASSPKSNTAYEAINRAMEYLQNNPPLPIVENILPTSPNYRYPHDFGGWVEQR
YLEAPLEFVKKTSKGFEKTLNEWLEKIRNKH
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctctccaatctcctgcgccctaataaattagaaaattttgtagggcaaagt
catatcattggtaaggaaacacctttatacaatgcactttctgctagagttttaccccat
tgtatcttttttggtcctccagggtgtggaaaaacaacacttgctcgaatcttagcccaa
agcattgggagtgaattttatgagttcaatgccacgcactttaaacttgaagatttaagg
aagatcattgctccaaattccttgcttaaacctgcaatctttattgatgaagtccatcgt
ctcagtaaaacccaacaagaagccctacttcctattatggaggaaaatcaagcctatatt
tttgcctcaagcacacttaatcctatattctcattgactaatgcaatccgctctagaagt
tttatttttgaattcctccctctcagaaaggaggaaatgcaaaaactcatagacaaggca
ttagaactcttaaaaatagacattacccatgaagcaagggaatatctcatctcttcaagt
ggtggggatgcaagagcaatgcttaaccttcttgatcttgcttcgttgagtgctccaatt
acccttaaaacactcaaatctttacgacctactccaatgaaagagggagtaagtgaagag
gatacacactacaatctctcaagtgcgctgattaaatctattcgtggaagtgatgagaat
gcaggaatttattatcttgctagaatcattgagagcggagagagtgcagagtttattgct
agaagattggttattttagcaagtgaggatattggtaatgccaatcccaatgcgctcaat
cttgctgtaagcacacttcaagcagtaagaaaaatcggttatccagaagctagaatcatc
cttgcacaatgtgtgatttatcttgcctcaagccccaagagtaatacagcttatgaagct
attaatcgtgcaatggaatatcttcagaacaatcctcctctacctattgtagaaaatatt
ttacccacaagtccaaattatcgctatcctcatgattttggaggatgggtggaacagaga
tatttagaagctcctttagagtttgttaaaaagacttccaaaggatttgaaaaaacactc
aatgagtggttggaaaaaattaggaataaacattag
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