Helicobacter cholecystus: NCTC13205_01060
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Entry
NCTC13205_01060 CDS
T06600
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13205_01060 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcl03400
]
NCTC13205_01060 (ung)
Enzymes [BR:
hcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC13205_01060 (ung)
DNA repair and recombination proteins [BR:
hcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13205_01060 (ung)
Prokaryotic type
NCTC13205_01060 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VEJ24899
LinkDB
All DBs
Position
1:1093513..1094211
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AA seq
232 aa
AA seq
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MDIQRIKLRDEWKKALKQEFDKPYFAHIKQCYLQAKARGEVIYPKGSLTFEALNRLAPNE
VRVVILGQDPYHGSERVNAEVIPQAMGLSFSVPKPLKAPPSLKNIYKELQNTTSFIPPNH
GDLSAWCERGVLLLNSVLSVQAGKAGSHAYFGWETFTDSVISYISCNLRGVVFMLWGNYA
KRKAILIDATKHCIIQAPHPSPLARGFVGSGVFLQANEALKSFGYAPIDWQN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtggatatccaaagaattaaactcagagatgagtggaaaaaggctttaaaacaagaattt
gataagccttattttgcccatattaagcaatgttatctccaagctaaggcaagaggtgaa
gtgatttatcctaaagggagtttaacatttgaggcacttaatcgtctcgcccccaatgag
gtgagggttgtgattttggggcaagatccctatcatgggagtgagcgagttaatgcagaa
gtcattccccaagcaatgggattaagcttctctgtccccaagcctcttaaggctcctcca
agtctaaaaaatatttataaagagctccaaaatacaacttcttttatccctccaaatcac
ggagatttaagcgcatggtgtgagagaggggtgcttttactcaatagtgtgctttctgta
caagcaggaaaagcgggatctcatgcatattttggttgggagacatttacagatagcgtg
atctcttatatttcttgcaatctaagaggggtggtatttatgctttggggcaattatgca
aagagaaaagcaattttaattgatgcgactaagcattgcattatccaagctcctcatcca
agcccacttgcaagagggtttgtggggagcggggtatttcttcaagctaatgaagctctt
aaatcttttggatatgccccaatagattggcaaaattaa
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