Helicobacter cholecystus: NCTC13205_01110
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Entry
NCTC13205_01110 CDS
T06600
Symbol
groL
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13205_01110 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcl03019
]
NCTC13205_01110 (groL)
03110 Chaperones and folding catalysts [BR:
hcl03110
]
NCTC13205_01110 (groL)
03029 Mitochondrial biogenesis [BR:
hcl03029
]
NCTC13205_01110 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcl04147
]
NCTC13205_01110 (groL)
Enzymes [BR:
hcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NCTC13205_01110 (groL)
Messenger RNA biogenesis [BR:
hcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NCTC13205_01110 (groL)
Chaperones and folding catalysts [BR:
hcl03110
]
Heat shock proteins
HSP60 / Chaperonin
NCTC13205_01110 (groL)
Mitochondrial biogenesis [BR:
hcl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NCTC13205_01110 (groL)
Exosome [BR:
hcl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCTC13205_01110 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NCTC13205_01110 (groL)
Exosomal proteins of breast cancer cells
NCTC13205_01110 (groL)
Exosomal proteins of colorectal cancer cells
NCTC13205_01110 (groL)
Exosomal proteins of bladder cancer cells
NCTC13205_01110 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
VEJ25079
LinkDB
All DBs
Position
1:1138788..1140425
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEINFSDSARNKLYEGVKQLSDAVKVTMGPRGRNVLIQKSYGAPAITKDGVSVAKEVE
LADPIANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNVTAGANPVEVKRGMD
KASEAIIEELKKGSKKVGGKEEIAQVATISANSDEKIGALIAEAMEKVGKDGVITVEEAK
GINDELSVVEGMQFDRGYLSPYFVTNSEKMNTQLDNPFILLTDKKITSMKDILPLLESTM
KSGKPLLIIAEDIEGEALTTLVVNKLRGVLNVAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGKTLESASIEDLGQAGRIVIDKDNTTIVDGKGNAQEVKDRVAQIRTQIESTTSEYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVSLSLKGDEQIGYEIILRAIKAPMKQIAENAGYDAGVVVNNVESAKEDTFGFNASN
GEYVDMFKAGIIDPLKVARVALQNAVSVSSLLLTTEATINDVKEDKPAMPDMSAMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagattaatttttcagatagcgcaagaaataaactttatgaaggtgtaaaa
caattaagtgatgcagttaaagttacaatggggccaagaggtcgaaatgttttaatccaa
aaaagttatggtgctccagcaattacaaaagatggtgtaagtgtagcaaaagaagtagag
cttgctgatcctattgcgaatatgggtgctcaacttgtaaaagaagtagcaagtaagact
gcagatgcggcaggtgatggaacaacaactgcaactgttttggcatacagtatttttaaa
gagggattaagaaatgtgacagccggcgcaaatccagtagaagttaaacgtggaatggat
aaggcaagtgaagcaattattgaggaactcaaaaagggaagcaagaaagtaggtggaaaa
gaagagattgctcaagttgcgacaatttctgcaaattctgatgagaaaatcggtgctttg
attgctgaggcaatggaaaaagtaggaaaagatggggtaattacagttgaggaagctaag
gggattaatgatgaacttagcgtagtagagggaatgcaatttgatagagggtacctttct
ccttattttgtaacaaatagtgagaagatgaatacacaacttgataatccttttattctt
cttacagataagaaaatcacttctatgaaagatattcttcctttgcttgaatcgacaatg
aagagcggtaagccattattgatcattgctgaagatattgagggtgaagcactaacaact
ttggttgttaataagcttagaggcgtgcttaatgttgcagcagtaaaggctcctggattt
ggcgatagaagaaaggaaatgctcaaagatatcgcaatccttacaggtgggcaagtgatt
agtgaagagcttggaaaaactttagagtctgcaagcattgaggatcttggacaagctgga
agaattgtcattgataaagacaatacaacaattgtagatggaaagggaaatgctcaagag
gttaaggatcgtgttgcacaaattagaactcaaattgagagtacaacaagtgagtatgat
aaagaaaaacttcaagagcgtcttgcaaaacttagtggtggtgttgcagtaattaaagta
ggtgcagcaagtgaagtagagatgaaagagaaaaaagatcgagttgatgatgctctaagt
gcaacaaaagcagctgttgaagaaggaattgttattggtggtggtgcggcacttatccgt
gcagctcaaaaagtttctctttcactcaagggtgatgagcaaattggatatgaaattatt
ctcagagcaattaaagcaccaatgaagcaaattgcagaaaatgctggatatgatgcaggt
gtagttgttaataatgttgagagtgcaaaagaagatacatttggatttaatgctagcaat
ggagagtatgtggatatgtttaaagctgggattattgacccacttaaagtagctagagta
gcattacaaaatgctgtaagtgtatcaagtctgcttcttacaactgaagcaacaattaat
gatgttaaagaagataaacctgcaatgcctgatatgagtgcaatgggcggtatgggtggt
atgggagggatgatgtaa
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