Helicobacter cholecystus: NCTC13205_01198
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Entry
NCTC13205_01198 CDS
T06600
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00470
D-Amino acid metabolism
hcl00550
Peptidoglycan biosynthesis
hcl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC13205_01198 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC13205_01198 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcl01011
]
NCTC13205_01198 (murD)
Enzymes [BR:
hcl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NCTC13205_01198 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hcl01011
]
Precursor biosynthesis
Amino acid ligase
NCTC13205_01198 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
Motif
Other DBs
NCBI-ProteinID:
VEJ25879
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All DBs
Position
1:1220845..1222065
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AA seq
406 aa
AA seq
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MIALLGFGKTNQALLEYINAQGIRCVVCDDGLEGEREDEFGNIFTYDLKHHITTLQIPSP
GIPPYNPMIKNAKNLLSEYDYILSQIQAMQIWISGTNGKTTTTEMLEWLLRDFGGVSGGN
IGTPLATLARQKPKIWILETSSFSLHYTKRVFPHCYILLPLSEDHILWHGSFESYIEDKL
SVLARMGEADVAFIPKALCAHPLIKNYKGRLYLYENSKDLAEFFGVELKSIPFKEPFLLD
ALLALNGAEVVCGQKRIQEIENYKIGEHKIQEFRDKEGRIWVNDSKGTNADATIWALRNY
KQKKIYLILGGEDKGADLSSLFEEMKAGKVEVFAIGKNALKLKELCDAYHIPCKICNILE
NAVKEIHSIHTQKSIALLSPAAASLDQFHSYKHRGEEFMHIVQSLR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattgcacttcttggctttggcaaaaccaatcaagcacttctagaatatattaatgcg
cagggtatacgctgtgttgtgtgtgatgatggtcttgagggtgagagagaagatgaattt
ggcaatatttttacctacgatttaaaacaccacattacgactttgcaaatcccttctcct
ggaattcctccttataatccaatgattaagaatgctaagaatttgctcagtgaatatgat
tatattctctcacaaattcaagctatgcagatttggattagcggaactaatggtaaaact
acgaccacggaaatgcttgagtggttgcttagggattttggaggcgtcagtggaggaaat
attggaacgcctctagctacacttgcaagacaaaaaccaaagatttggattcttgagaca
agttctttttctctgcattacaccaaaagagtattcccccattgctatattttacttcct
ttgagtgaagatcatattttatggcatggaagttttgagagctatatagaagataagttg
agcgtattggcaagaatgggagaagctgatgtggcatttatccctaaagccttgtgcgcg
catcctttgattaagaactataaaggaagattatatttgtatgaaaattctaaagattta
gcagaattttttggagtggagttaaaaagtatcccttttaaagagccttttttgcttgat
gcacttttagcacttaatggagcagaggtggtgtgtgggcaaaagaggatacaagagatt
gaaaactacaaaataggggaacataaaattcaggaatttagagacaaagagggaagaata
tgggtcaatgattctaaggggacaaatgcagatgcaacaatttgggcgcttagaaattat
aagcaaaaaaagatttacttgattttgggaggagaagataagggagcagatttaagttct
ctttttgaagagatgaaagcagggaaggtagaggtttttgcaattggcaaaaatgcttta
aaactcaaagagctttgtgatgcctatcatattccttgtaagatttgtaatattttagaa
aatgcagtaaaagaaattcattctatacatacccagaaaagtatcgcacttctttcacct
gctgcagcaagtcttgatcaattccattcctataagcatcgtggagaggagtttatgcat
attgtgcaaagtttgagataa
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