Helicobacter cetorum MIT 99-5656: HCD_01100
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Entry
HCD_01100 CDS
T02033
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm03030
DNA replication
hcm03430
Mismatch repair
hcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCD_01100
03430 Mismatch repair
HCD_01100
03440 Homologous recombination
HCD_01100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcm03032
]
HCD_01100
03400 DNA repair and recombination proteins [BR:
hcm03400
]
HCD_01100
Enzymes [BR:
hcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCD_01100
DNA replication proteins [BR:
hcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCD_01100
DNA repair and recombination proteins [BR:
hcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCD_01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_14
AAA_22
AAA_5
AAA_assoc_2
DNA_pol3_gamma3
RCF1-5-like_lid
EH_Signature
AAA_30
DEAD
AAA_19
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFI05252
UniProt:
I0EQN3
LinkDB
All DBs
Position
complement(221535..223244)
Genome browser
AA seq
569 aa
AA seq
DB search
MRVLALKYRPKHFSELVGQDSVAKTLSLALDNKRLANAYLFSGLRGSGKTSSSRIFARAL
MCEVGPKAVPCDTCIQCESALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VIAHLKTILEKEKVGYEESALEKLAHSGQGSLRDTLTLLEQAINYCDNSITESKVAEMLG
AIDRSVLEDFFQSLINQDEALLQERYEILENYETEGVLEEMMLFLKAKLLSPSSYSLILI
ERFFKIIMSSLSLLKEGANSSFVLLLLKMKFKEALKLKALDDAILELEQTKEKISQSPLN
QNPTINHNAPKKETPRIEKESLETKILETSQEKTLQASTLSAKEQIFQNLFKQVQKLVYE
RNYELGAVFEKNICFVDFDSNTKTLTWESLATGKDKELLKQHFVVVKNIVDEIYAKGSKV
KVALKTQKESVENEIQKNQSARPPLMEPQNKVKEKLQATERQATENKEVEAQTIEKETPL
TELQEFVTHHSQLIEEIKSEFGVKSVELL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcttagcgttaaaataccgccccaaacattttagcgagctagtaggacaagat
agtgtagccaaaacgctttctttagccctagataataagcgtttggctaacgcttattta
tttagtgggttaagaggttctggtaaaacaagctcttctaggatttttgccagagcgttg
atgtgtgaagtgggaccaaaagctgtgccttgtgatacttgcattcagtgtgagagtgct
ttaaacaaccatcatattgatattatagagatggatggggcttctaatagggggattgat
gatgtgcgtaatctcatagagcaaacccgctacaaaccaagctttgggcgttataaaatc
tttatcattgatgaagtgcatatgtttaccacagaagcgtttaacgctcttttaaagact
ttagaagaaccccctagtcatgtgaaatttcttctagcgactactgatgctttgaaatta
cccgctaccatactcagtcgcacccagcattttaggtttaaaaaaatccctgaaaattct
gtaatagcccatttaaaaaccattttagaaaaagaaaaagtgggttatgaagagagtgcg
ttagaaaaactagctcacagtggacaaggaagcttgagagatacgctcactcttttagaa
caagccataaattattgtgataattctattacagagagcaaagtggctgaaatgttaggg
gcgattgatagaagcgtattagaagacttttttcaaagtttaatcaatcaagatgaagcc
ttattgcaagagcgttatgaaattttagaaaattatgaaacagaaggcgttttagaagaa
atgatgctttttttgaaagcaaagttattaagtcctagctcctattcgttaattttgata
gagcggttttttaaaatcattatgagtagcttgagtcttttaaaagaaggggcaaattct
agctttgtgctgttattattaaaaatgaaatttaaagaagccttgaagcttaaagcctta
gatgatgcgattttagaattagaacaaactaaagaaaaaatctctcaatcccccttaaat
caaaaccctacaataaaccataacgcccctaaaaaggaaactccaagaatagaaaaagaa
agcttagaaaccaaaattttagaaacttcacaagaaaaaaccctacaagcttctacgcta
tcagccaaagaacaaatttttcagaatttattcaagcaagttcaaaaattagtttatgag
cgaaactatgaattaggggctgtgtttgaaaaaaatatttgttttgtggattttgatagt
aatactaaaacactcacttgggagtctctagcaactggtaaagacaaagagcttttaaaa
cagcattttgtggttgtaaaaaatattgttgatgaaatctatgctaagggtagtaaggtt
aaagtcgctctaaaaactcaaaaagagagtgtagaaaatgaaattcaaaaaaatcaaagt
gctagaccccccttaatggagccacaaaataaagttaaagagaaactacaagctactgaa
cgacaagccactgagaataaggaagttgaagcacaaacgatagaaaaagaaacccccctt
acagaattacaagaatttgttactcatcattcgcaactcattgaagagattaagagtgag
tttggggttaaaagcgtggagctactatga
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