Helicobacter cetorum MIT 99-5656: HCD_01430
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Entry
HCD_01430 CDS
T02033
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Pathway
hcm00300
Lysine biosynthesis
hcm00470
D-Amino acid metabolism
hcm01100
Metabolic pathways
hcm01110
Biosynthesis of secondary metabolites
hcm01120
Microbial metabolism in diverse environments
hcm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HCD_01430 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HCD_01430 (dapF)
Enzymes [BR:
hcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HCD_01430 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFI05318
UniProt:
I0EQU9
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All DBs
Position
291311..292117
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AA seq
268 aa
AA seq
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MVFYKYSGSGNDFLITQSLKKQDFSHLAKLVCHRHEGFGADGLVVILPHNHYEYAWDFYN
SDGSKALMCGNASRCVGLHAYKHKIAPKHHTFLANKREISIHIEEPNIVESNLGNYQILE
KISALKCEKSFSNSAILEDILTFYLIDTGVPHLVGFVKSKQLLSSLNPLELRALRFKFNA
NVNIAYIQDEKNIFLQTYERGVEDFTLACGTGMAATFIAAHTFYNTLTKATLIPKSNEYL
ELSLKNNEIFYKGGVHYIGMGIFEPNFS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggtattttacaaatactctgggagtgggaatgattttttaatcacacaaagtttaaaa
aagcaagatttttcacatttagccaagctggtgtgtcatagacatgaaggctttggagct
gatgggcttgtggttatattgccccataatcattatgaatacgcttgggatttttataat
tcagatggctctaaagctcttatgtgtgggaatgcgagccgttgtgtcggattgcatgcc
tacaagcacaaaatagcccccaaacaccacacttttttagctaacaagagagaaatttct
atccacatagaagagccaaatattgtagagagcaatttaggcaactatcaaattttagaa
aaaatatccgccctaaaatgtgaaaaatctttttcaaactccgctattttagaagatatt
cttactttctatctcatagataccggtgtgccacatttagtagggtttgtcaaaagcaaa
caactcctatcttctttaaatccgttagagctaagagctttgcgttttaaatttaacgct
aatgtcaatatcgcttacatacaagatgaaaaaaatatttttttacaaacttatgaaagg
ggggttgaagattttactctagcttgtggaacaggtatggcggcgacttttattgcagcg
cacacattttataacacactcacaaaagccaccctcattcctaaaagcaacgaatattta
gagctttctctcaaaaataatgaaatcttttataaggggggggtgcactacattggaatg
ggtatttttgagcctaatttctcataa
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