Helicobacter cetorum MIT 99-5656: HCD_01525
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Entry
HCD_01525 CDS
T02033
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcm03032
]
HCD_01525 (gyrB)
03400 DNA repair and recombination proteins [BR:
hcm03400
]
HCD_01525 (gyrB)
Enzymes [BR:
hcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HCD_01525 (gyrB)
DNA replication proteins [BR:
hcm03032
]
Prokaryotic type
DNA Topoisomerases
HCD_01525 (gyrB)
DNA repair and recombination proteins [BR:
hcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HCD_01525 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFI05337
UniProt:
I0EQW8
LinkDB
All DBs
Position
complement(308414..310735)
Genome browser
AA seq
773 aa
AA seq
DB search
MQDYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCNTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTVLHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTRSAKESGTTIEFFPDESVMEVI
EFQASILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPIIS
FKSMDEETHTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPVSEDIKEGLVAIVSLKMSEPLFEGQTKSKLGSSYVRPLVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPMESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DLEKLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIENGHVYIAQAPLYKYKKGKTE
IYLKDSVALDYFLIEHGINSVSVEGIGKNDLMSLLKVVRHYRYVLLELEKRYNLLELLRF
LIETKDALALDTKVLEKSILEKLESLNYQVLRSFATEESLHLHVQTPKGLVEFNMDDNLF
KEVLFEEASYTYQKLMAYNLDFLEDKDILAFLEEVENHAKKGASIQRYKGLGEMNPNDLW
ETTMHKENRSLVKLKIQDLEKTDAMFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattaccaaagccatagtattaaggttttaaaaggcttagaaggggttagaaaa
cgccctggaatgtatattggtgataccaatgtaggcggattacaccacatggtgtatgaa
gtcgtggataacgctgtagatgaaagcatggcgggcttttgtaacactatcaatattact
ttgactgatgaaggctcatgcattgtagaagataatgggcgaggaatcccagttgatata
caccctactgaaaaaatccctgcttgcaccgtggttttaacggttttgcatgctgggggt
aaatttgataatgatacttataaagtctcaggtggtttgcatggcgtgggtgtttctgtc
gtaaatgctctaagcaaacgcttaataatgacgattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggaatccctattagtgagcttgaaatcattggcaagactagaagt
gctaaagaaagtggcactaccattgagtttttccccgatgaaagtgttatggaagtgatt
gaatttcaagcgagcattttacaaaaacgctttaaagaaatggcgtatcttaatgatggt
ctaaaaatttcttttaaagaagaaaagacccaacttcaagagacttatttctacgaagat
ggcttgaaacaatttgtcaaagatagcgctaaaaaagagttgcttacccctattatttcg
tttaaaagcatggacgaagaaacacacacttctatagaagttgccctagcgtatgctgat
gattacaatgaaaacaccttgagctttgtgaataatattaaaacttctgaaggtggaaca
catgaggcgggctttaaaatgggcttgtctaaggcgattttacaatatattgacaataat
attaaaactaaggaatctcgccctgtttctgaagacattaaagaaggcttagtggctatt
gtaagcttgaaaatgagcgagcctttatttgagggacagactaaatcaaagcttggtagc
tcgtatgtgcgtccgctagtttcaaaactagtctatgataaaatccatcaatttttagaa
gaaaatcctaacgaggctaaaattatcgctaataaagccttattagctgctaaagctaga
gaggcaagcaagaaagcaagagagcttacaaggaaaaaagataatctaagtgtgggcacc
ttgcccggaaaattagccgattgccaaagcaaagaccccatggagagtgaaatctttttg
gtagagggtgatagtgcgggcggaagtgcaaaacaagggcgagatagggtttttcaagcg
attttacccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaagattcta
aagtccgaagaaatcaaaaacatgattacggcttttgggtgtggcattcaagagagtttt
gatttagagaaattgcgttatcataaaatcattattatgactgatgctgatgtagatgga
agccatatccaaactttgcttatgacctttttctatcgttatttacgcccactgattgaa
aatgggcatgtttatatcgctcaagcccccctttataaatacaagaaaggcaagacagaa
atttatcttaaagacagcgtagctttagattattttttaattgagcatggcatcaattcc
gtgagtgttgaagggattggcaagaatgatttgatgagcttattaaaagtcgtgcgtcat
tatcgctatgtgcttttagaattagagaaacgctacaatttgctagaacttttacgcttt
ttgattgaaactaaggacgctctagctcttgatactaaagttttagaaaaaagtatttta
gaaaaattagagagtttgaattatcaggttttacgctcttttgctacagaagagagtttg
catttgcatgtgcaaacccctaagggcttagtggaatttaacatggatgacaatctcttt
aaagaagtgctatttgaagaggcaagttatacttatcaaaaacttatggcatataatttg
gatttcttagaagataaggatattttggcgtttttagaggaagtggaaaatcacgctaaa
aagggagcgagtatccaacgctataagggattaggcgagatgaatcctaatgatttatgg
gaaacgactatgcataaagaaaatcgtagtttggtaaaactaaaaatacaagatttagaa
aaaactgatgcgatgttctcgctgtgcatgggcgatgaagtagagcctagaagagccttt
atccaagctcatgctaaagatgtgaaacaactagatgtgtga
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