KEGG   Helicobacter cetorum MIT 99-5656: HCD_04260
Entry
HCD_04260         CDS       T02033                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hcm  Helicobacter cetorum MIT 99-5656
Pathway
hcm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HCD_04260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcm03400]
    HCD_04260
Enzymes [BR:hcm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     HCD_04260
DNA repair and recombination proteins [BR:hcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HCD_04260
 Prokaryotic type
     HCD_04260
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AFI05866
UniProt: I0ESE7
LinkDB
Position
886535..887236
AA seq 233 aa
MKLFDYAPLSLLWREFLQSEFKKPYFLEIEKRYLEALESPNTIFPKSSNLFNALNLTPPH
AVKIILLGQDPYHSTYLENNNELPVAMGLSFSVNINAPIPPSLRNIYKELHANLGVPIAC
CGDLSAWAKRGMLLLNAILSVEKHKAASHKHIGWERFSDRILERLFETTTPLIVVLLGQV
AQKKSALIPSNKHIVITAPHPSPLARGFLGSGVFSNIQKAYREIYHTDFDFSL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaaactttttgattacgcccctttgagcctactttggcgagagtttctacaaagcgaa
tttaaaaagccctatttcttagaaatagaaaaacgctatttagaagccctagaaagccct
aatactatctttcctaaaagctcaaatttgtttaacgctcttaatttaacacccccccat
gccgttaaaatcattctcttaggacaagacccctaccattccacctacctagaaaataac
aatgaattacctgtagccatggggttaagctttagtgtaaatattaacgctcctattcca
ccaagcctacgaaatatctataaagaattgcatgcgaatttaggcgtgcctatcgcttgt
tgcggggatttgagcgcatgggctaaaaggggtatgttgttattaaacgccattttaagc
gtagaaaagcacaaagccgcttcgcacaagcatattggctgggaacgctttagcgatagg
atattagaacgcctttttgaaaccaccacccccttaatcgtggtgttattaggacaggtc
gctcaaaaaaagagcgcattaattccgtctaataaacacatcgttatcacagcaccacat
cctagcccattagctagggggtttttagggagtggggttttttcaaacattcaaaaagct
tacagagagatttatcacacggattttgacttcagcttgtaa

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